General information for g10146.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as FERM, ARHGEF and pleckstrin domain-containing protein 2.
Parent gene
- The parent gene g10146 is located on chr_1: 7781300..7782838 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_1 | g10146 | g10146.t1 | TTS | g10146.t1 | 7764202 | 7764202 |
| chr_1 | g10146 | g10146.t1 | isoform | g10146.t1 | 7764333 | 7781584 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon1 | 7764333 | 7764650 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS1 | 7764333 | 7764650 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon2 | 7764714 | 7764865 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS2 | 7764714 | 7764865 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon3 | 7764925 | 7765513 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS3 | 7764925 | 7765513 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon4 | 7765837 | 7766142 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS4 | 7765837 | 7766142 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon5 | 7766204 | 7766532 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS5 | 7766204 | 7766532 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon6 | 7768067 | 7778395 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS6 | 7768067 | 7778395 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon7 | 7778702 | 7778998 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS7 | 7778702 | 7778998 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon8 | 7779171 | 7779274 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS8 | 7779171 | 7779274 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon9 | 7780018 | 7780092 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS9 | 7780018 | 7780092 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon10 | 7780185 | 7780210 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS10 | 7780185 | 7780210 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon11 | 7780295 | 7780429 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS11 | 7780295 | 7780429 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon12 | 7780505 | 7780748 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS12 | 7780505 | 7780748 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon13 | 7780821 | 7780944 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS13 | 7780821 | 7780944 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon14 | 7781000 | 7781330 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS14 | 7781000 | 7781330 |
| chr_1 | g10146 | g10146.t1 | exon | g10146.t1.exon15 | 7781396 | 7781584 |
| chr_1 | g10146 | g10146.t1 | cds | g10146.t1.CDS15 | 7781396 | 7781584 |
| chr_1 | g10146 | g10146.t1 | TSS | g10146.t1 | NA | NA |
Sequences
>g10146.t1 Gene=g10146 Length=13548
ATGTCATTAAATTCATTGGGCACATCAAATACAAATGGACTGCCAAGCAGTCGCATGACA
CATTCGTTGAGTACACCATCAGGGGTCGATGGATCGTCTGCTGTCACGCAACATTCGCGA
GGTGGTGGAAAAAAGCTCGCAATTCGTGTACAAATGTTGGATGATTCAATGACACTCTTT
CAAGTTCAGGCAAAGGCACTTGGAAAAGTTTTATTTGAGCAAGTCTGTCGACAATTGAAT
CTTCTTGAAGCAGATTATTTTGGACTTGAATATACAGAAAGTTCGTCAGGCACAAAATAT
TGGTTGGATTTAGAAAAACCACTCAATAGACAAGTTGGTTTCTCGCTCATTGATCCACTT
TTGAGATTTTGCGTGAAATTTTATGCCAATGATCCAACACAACTCGAAGAAGAGTATACG
AGGTATTTGTTTTGTCTACAAATCAAGAGGGATTTGGCTACGGGCAGTTTGCAATGTAAC
GACAATACAGCAGCTTTAATGGCCAGTTATATCGTGCAAGCCTCTTGTGGTGATTATTCC
TTTGAGGACTATCCCGATCACACTTATCTATCTTCGTATCGATTTGTACCACAGCAAGAT
CAAACGCTTCAGCGAAAAATAATGGAAAATCATAAAAAGCATATTGGACAATCGCCAGCT
GAAGCAGACTTAAATCTTTTGGAGACTGCAAGACGTTGTGAACTTTATGGCATGAAAATG
CATGCAGCCAAAGACCATGAGGGTGTTCCATTGAACTTATCTGTCGCGCACTTTGGCATT
GCTGTTTTTCAGGGCATCACGCGCATCAATACATTTTCATGGGCTAAAATTCGTAAACTT
TCGTTTAAACGTAAAAAGTTTTTAATAAAACTTCATCCAGAGGGATATGGCTATTACAAA
GACATTGTCGAATTTTTCTTTGAAGGCAGAAATGAATGTAAAAATTTTTGGAAAAAATGT
GTTGAAAATCATGGCTTTTTCCGATGTCAAGCAGTTCAGAGTGCTCCAAGAAGGAAAACA
AGAGTTCTCTCTCGAGGAAGTTCATTTCGTTATAGTGGAAAGACTCAAAAACAAATTATC
GAGTTTGTACGTGAAAATTATGTAAAACGACAAACGTTCCAAAGGTCTCAATCGTTTCGT
CAGGGCCCGTTAGCAAGTAAAAGAAGTCAATCGCAAAATGTTGTTAATACAAGCATCTCA
GCACATCCTTTACTTCCCATTGAGACCGCGGATTGGGAAGCTCGCAAGCAGAGCCTAGAA
TCGAAGACGCCTTCTCAGATGAAGAAGGAAGTGGATATGGAGAAAACTCGCCAACCCGCA
ACTCTTACCCCTTACAGTCAAACGACCACCACGGTAGTGGAGAGTTATCCGATGAAATTG
GACAATCGTCGCCCGAGCAATCAAATGGATTCGAGTCTCTCTGTATCTCCAGCGGTGACT
ACTCCCCTACGCAACATCATCAACAATGCGCCCGAAGTCGGTCAGGTTCATGCGCTTCAA
GGCGATCGCAACTTAGTCAATTCCGCACGGAATTACCATTCGCAAATTGCCACTACATCC
CCCAATTATATTCATCACAACAACACATCCACACCGGTCAACCTTTATCAACGGCACCAA
CGCTTGGTGGGTCTCAACAATTCTATGTTGGAGACAGAGGCATCTTCGACCAGCCACGAG
AGTATTCAGGGCATTTCACACCGTTACACCCAGGATCAATCAATGGGTCATGTCACATCA
GCCCGTTATAGCAGCACGAGTGCTTATTCGATGTCTAATGCGGCTAATCTCAACAATAGC
AAGTTTGACGTTAGCACCGCAACTGATCTGTCAGACGAAGACATCGATAACATCATTTAT
TCTGACATCAATGATTTACACAAGCAGCAACAAAAACAGCAGCAGCAGCAAATTAGTAAT
AGTAATAGTAATGCTAATAGTAATAATAACCTAAATAATACTCACACAATTCAAACGCAA
ACCTCGAGTGAAATAAACACTTTTGAGCGTACGGCACGCGCAGATGATGACGAAGATGAC
GATGAAGACGATGAAATTAAACCATATGTCTCACGTATGTCATTACAAAAAATGACAGCT
GTCACACAACCGCTCATCATTAATACAAATGATTTGTATGCGACAATCGATCGAAAAACA
AAAACTAAAGCAATTAAACCGCTTTTAACAACCGACGATGACATTGATTATCGCAACAAA
TCTGATATGAAAATGAATGCTAAAAATTACTCGAGTGAATTTATAGACAATAGCATTAGG
AATATTAATAATGTATTGAGTAATATTGAAAATTATCAATATCAGGCTAGTCTTGATTAT
AGCGTTAATCCACCTGAGGGAAGTTTATCGGGCTTCGATTCTCAATTTCGCTCTACTCTC
GCCTCTCATTCTGATCATTTTCTTGCCTATGATAATAGCTTTAGTCGCGTAAATATAAAC
ACTTCTAATTCACTACCACGAAATACTGAAATGTCTTGTATTGAATCATTAGACTCATAC
GATAGCCATTATTTGACACATAATAATAATACTTCAATGGGTAATTTAGAAAATAATACT
TCACTACACTATGCTAGCTTAATGAAACCTGAAAATCAAATTACAAACTATCAAAGAGAA
TTTAGTGGTTCAAGTATTTATACAACGCTTCAAGCTCATGACGATTACGAAGATGACGAT
GTTGAATATTCTAAAAATTATGAATTGAAATATAAGAAACCAGAATATGGATTTATGACA
TCAGAAAGAGAATTTCTCACGAGTGATCGTATTGATTCGCCAATTACTCGATATGATGAC
GATTTTCGACGTTCAAATTATGAAACTAATAGAAAATTCTCAATGGATCTCAATGAGGAC
TTTAACTTGCCAGAGACAAAAGTTTATTCATCAAGTTATCCAGGCACAACATATAATACA
ATCGACCAACACTTTAAGCGCACTACTTATTCGCAATATGAATTCAATGGATCACAAGAT
CTTTCGCATGATAGTTATGAGTTGCTTGAGAAATCTGATGATGATTTCTATTACAAATTT
AAGCATAATACTAATGACCATCATGCAAGATCCTGTTCATTAGATTCAGGCAATTTTATT
CCAACTGATTATGAAAGCGATGAAGAAAAACATGGTTATGGTAATAGCAAATATCGCTCC
TCATTTGAAACAAAAAGTCGAAGTGCTGCTGATATAATGAATGACATTTTCTTATTAGAT
GACCCGCGTGACTTGCCTAAAGAAAAATTATGTGTAAAGTCAGATGGCAGTTTTTATAAG
CATGTTAAACAAGCTATGGGTATAAGAACATCTAGTCAAGAATCACAAAGTGAATATTAT
GAATCGAAAATTTCCAAAAGCAGTGGAAGCAGCAAAAAGAGCAAAGATAGTGTCTATCAT
ACTGACAGTAATAAAAAGAACTCGCGAGAGACACTCAAGAGTAAATCTGGTTCTGAATAT
AATCCTTCAAGTCCTGAAGAAATTTTCTTAGTCGGTGAATTGCTTAATAGAAATAACTAT
GAAATGCCAACAACTACAGCAAAGAAGACGAAAAATATCAAGAAAATGCTTGAAAATAGT
TCTAAAAATTCAAGTCAAGATTCACGTAGTGATTTTAAAAGTGCATCACAAAGCTTTGAT
GATGGTGATGATATGCAAAAAGTTTTATCATACGAAAATATTGCAAGGGAAAGTGTCGAT
TCAGCTGGTGGTTATGATAGTCAAGTTCATTTCTCAACATTCCCTAGCAATAAAAGTGGG
ACAACTGTCAAAACTTCTCATGTTCAATCAATAAGCTTGCAAAATGTAGAAATTGAAAGG
AATGTCAAAACATATTCAACTTTCAAAGCATTCAGTCAATCAGCAAAGCCACCATCAATT
GAAAGTTATACTCCTAAAAAGACTCACATTTGGCCAGAAGAAATAGAAGGTTTGGAGACA
GAAATTTCTGGTGTTGAACGAGCTAAAAATTATCGAAAACGTTCTGATGGTGAAAACAAC
ATTTTTAGCTTCGATAAAGATAAAATTGAGTCATTGACATCATCAGTTGATAACGAAAAT
ATGATTTTTGATAAGCCTAAAAAGAGTCCTGATTATCCATTGACACCTGAATTACTATCA
GAATTTGATAAACAAAAAATTGAATCGCCTAATCAAAAACCGAAAATAACTAGTAGAAAA
GAAGAATTGATGGCAAAAACACACTTTGAAGAGTATAATCCAAAATTAATGATTGACACT
AAAATTCAATTGCCATATCCTCATACAACAGTTGAAAGGACAAAAAGCGATCCTAATTCT
TTAGCAAATAGACCAAGATTAACAGCAAATTCAAGAAGGCACACACTCATGCATCAAAAA
TCTATTGATTTAACACCTGCTGATTCTAGTGAAGACGAATACATGTATAAACAACCTCCA
AGTGCTCCACCAGTCTTTAAAAATCATCCTCATTTTGAGTTACCACAAAAATATGATCCA
AATATGAATTTTGATATTACACAAAATTTTTTGAAAGACTTTGAAAAACGTGCTCAAATT
CCAATTAAAGATGACATTCCTTATGTTTTACATAAACGTCATATTATGAATGGTACTGCT
GCTTCTCCTAATCGATTTCCTAAACCTAAAAGTCCCAAGTCACCAAAAAGTCCTAAATCG
CCAAAGTCACCGAAAATTGACAAAGCAACAGCTGATCCAAAAGGTTCACAAGATTTTCTT
TTTACTAAAAATATTGACTTATCAAAAGTTGATATCAATACATTAGAACAAAAAGAACCA
ACTACAACTGTGAACTTGAGCAGTCCTAAACATCATAAAGACATCACAAAGCATCTTGAT
CCAAAATCATTAGAAGCATTAAATAATAAATTGAGTCAAATTGAAAGTGATTCTGCAACA
AGCTCAAAAACTGATACTCATCCAACAAAAGCTAAGCCGCCAGTTCCAATAGCTCATAAA
ATTGATCCAGCAACTATTAAAAAAGAAGCTGTTTTATCTGGTAAACGTGCAGTCAAACCA
AGATCAGGTCAAATAAAGAATAAAAATAATTTGAAAACTCGCTCGAAGGCAAAAACTCGT
ATAACTTCTTTCTCATCAGATGATGAAAGTATTGATTCTGATGATGTTTTTGGTTCTGCA
GAAGCAATGCCTACAAAAATGGAATTTAGTCCTCCACAATCGAGAAAAGAAATGGAACCA
ATTCTCAAACATGAACATAGCAGAATTTCTCAAGCTGCATGGGCTCGTGGTCAAACAATG
AGCTCAACTGAAGTTGAAGGTTCACCACCACAAGTAAGGAAACTCGCTGACCTTGAAAAT
CGCTATCACACGCACAAGCTTGATACAAATTTCATGACATCATCAGAATTGCGTCGAATT
TCTGAAAGATCTATTTCCATTCCAAGCTCAGAAGAAGATGCAAATGGTAGTACATTAAAA
TGTGAATTGGCTACAGAAATTTACAGAACAACTGAAAATTTAGCTGAAATTGAAGATGAA
GAAGAGCAAATTAAAATAGATGAACCTGAAGAGCAAAAGCAAATTGCAAAAGTTGAACCT
ATTCCAAAAAGTAAAGCAAAAATTCTTGAAGAATTAATCGATTCATCAATGATAATCCGC
TCAAAAGGACATGCGCCTATTTTATTTGCTCATGCGAGACTTAATTTATCGGAAGGTTCA
GCATTTGCATCACTTCAGCGTCAATCAGCTCAAGAATTGCCAGGTGGTGAACGTAGAGCA
AAAAGTCTAGATGCTCCTGTAATTTCATTGCATCGTTTGCCACCAATGAATGCGTTTTCA
TCTAAAGATGACACTGTTGCGTTTGAAGAAGAAGCTGAAACATTGGAAGTGAAAAAGTTA
GATAGCACAAAAGAAGATGAAGTAGAATCTCAAGATTTCTTAATTTGTGATAAAATGCAA
TCGCCATTAGAGCCAAAAATTCAACCTGAAACTATAGAATCAACTGTAGTTATTGAGAAT
GATGAACTTGAACTTTTAGATCGACTAAAATATATTGAAAAAATCACTTTACAAGGAGTG
AAAATTAAAGAAAAACGTAAATCGAGAACACAACTCAAAAGTGGCAATCAATTGATATTA
GAAATTCCAAAATACAAATTTGAGCCATTCAGTTCCGGCAATAGTTCATTAAAAACATCT
CCAGCTGTAAGTCGCGCAAGCAGCACAGAAAGAAGCTCATCTAAAAATAAAAATGAAGCT
TCGCCAACAAATATGGCAAAGAAACCGCCAGTAAAGCCAGACCGTGGTGATGTAAAACGT
TCACCAAAAAGCTCAAAGAATTTAGGAGACAAATTAAAAGTGCCAGGTGATTCACTTCAA
AAAGCAGGCACAAAAGAACGTTCAAAGTCTTTAGAAAAAGTCACACCCAAACATTTTTCA
GTTAAAGGTAGAAAATCAATAACTGAAGAAACTGAATTAGAAAAACTAAAAAGAAAAGAG
CGGCAGCAGAAACTTTATGAGTCTGCTATGAAGCAAACAATTAATATGCTCTCACCTGTC
AAAGACCAATTGCCAACATTTCCAGTTGTAGAGGATAAAATTTCTGTTAAAAAAGAGGGC
GATAAAATAATTATAGATGCTGAAATAAAAAGTAAGCCAGAAGATCACGTTTTAATTGCA
AAATCCCCTCGGAAATTAGATAGCACATTAGCAAAATTTAGCCGCAGCTGCGAAGAAGGC
AAAAGTATTGAGAAATTAGATAAAGCCAATCGTAGCTTCGAAGATAGACACAAATCATTT
GAAGATTCTGAAAAATCTGATAAAAGTCAAAATGAAGATGCAGAACAGAAAAATATGCTA
GCTAAAAAAGAAGAATTAAAAAGGGAAATTGAAGGTGCTGTGGTGCATAAAAAGATTCAA
GGAAAATCGAGAAGTTTAGAAAAGAAACAAGAGCAAACGAGTTTTGTTGAGGCAAGAAAT
AAAACAAAAAGTTTAGATAATTATTTTGATGCTATTGAGCCTACTTTCAAAAAAGACTTG
GCAAAATTAAATCAAGAAGTTAAGGACGCTAAGGAAGTTATAGCAAATAAAAAAGAAGCC
ACACAGAAGAAGGCAAAAGATGATAAAAATGTCACAAAATCTTCTAGTGTCGATAAAGTC
ACACAGCAACAGCAAGCCAAGCATCATATTGACAAAAGAGCAATTTCTTACCCAGAAAAT
CACAATGATGTTGACATGCAAGCAATTATTTCAGAGAGGAGAAACCTTGATTTTATGAAG
CGAAAATCTGAAATGGATGAAGAAAGCTCTTTGACATCAGTAACCGATGTAAAAACTGAA
AGCATGGACAATTATTTTTTTACACGTATTCCAACAATCAGCTGTGAAGAGCCATCAATA
GAGGAAGAAGATTTTGAAGAAATGGAAGCAAATGATGAGCAGAATATCCAAGAATCGCCT
AAAACAAATGAAAGTGAAACACCGAGCTCTACTTCAAAAAATAGTGACGATATTAAAAAG
AAATTTGATATCGACGATTTGTCAGATCTCACTAAATGCACTGATGAAAAAAGTAAACAA
GAGCAATTGCTTTATCAAGCACAAGCAGCAAATAGGAGAAATTTTCTCAAACTCAGCATT
GAAAAATCGAAAAGTTCCGATTCAAGTATCGATCGAGAAAAAGATCCACTAAAACCAGAA
CGGCAAGACTCAAGCACATCGTATAGCAATAAAGAGAAAAGTTCATTGGAAGAAGAATCG
AGTGTAAGCTGCTCTATTGCAAAACCACTCGGCATTTCCGAGGATTTTATCGATCCAAAT
GAACAAATGCGATGCCGAGAGCTATTTGATGCGATGATGAAACTAGAGAAAATTGAGGAA
GAAAGTAAACTGCCAAAAAAAGCATCACCAACATTAGAAAAGCAATTTCCGATTGATTTA
GGTTCTGGATCTGAGCTCGATTATACTGATCCCGTTGAAGACCGCATTTCAAAGATATTG
GAAAGAAAAGATACTGATATTAGGCCAATAAAGCCAAAAATACAAAAACCGCCAAGAGAT
TTGTCATCACATAAAAAAGTAACACGTGCAATCCCACTTGAAGACTTATCTCAACCGCCT
GAGCAGCTTCAGGCTAAATTGAATACAGCTCACAAATACTTGAACGCAACTCATAGTGGT
AGTTCATTAGAATCAAAATCAAGTGTCGAGTCAAAGAGCTCATTGAGTGTTGACCGTGAA
TCATATGAAACTGAAAGTAGCTCGGGTTCACTTGGAAAAGCTCATAAACGTGGTGAATTG
GCACAAAAACAATTGCAATCAACTTTCAAGTCTTTTCCAATAGAAAGTTCAGGGTCGTCA
CAAGAAGATCCTAACTGGCATCCTGACCATGAAACATATGAGAAATTTGAAGTGATTGAA
TCACCATCAGACAGAGACACAGGAACAGATGAACATACAAAAGAAAGTGACTCTGATTAT
CAAGATGATACTGCTGAATTGCAACAGCAATATGCAAGTTATAGTTCTGAAACTTCGAGT
CAATCGACATTGAATCCATTAGGTGCTTTGGGTTATGGTACAGGTTTTGCAATTGGCAGA
ACTCTTTCACGTATTTCTGAAAGAAGCACAAATTCTGAAAAATCGAGTAATGAAGAAGAA
AAGACAAGCATTGATGAAGACATAAGTGCACATGAAGAAGAAGAACATTCTGTTGCTTCA
AGTGACCATCAAGCTAGTATGAGCTCTGAAATCCATAGCAATTCGCATCAAGCCTACATA
TCTGATACAGATCGCAGAACCTCTGCTGAAATGCCTGACATTCCTTGTGATACTGCAGCT
GCCGAACGTTTAGCTGAGCTTTATTATAAATCAAATATGACAAAAACAGGACGTTTTTCT
GTATCAAATGTTGAAGATAAAGATAAACATCGATTAAAGACTGAAGTACTCGCTGGCTCT
GGAAGTAGCCAAGAATCTGAAGATTGGCCATTGCCTGAAATTCCAATAGAACAACAGCAA
AAAGAACAAGAAAGTTGTATTTTCAAAAATTCTAATAAGCCTGTTCCAAAAACATTCTGT
TGGCGAAATAGCACTAGTGGCATTCAATCTCAAGATTCGGAAATTTGGCCGTCACCACCA
TCAAGTGTAATAGAAGCACCTCCATTAATTGAAAATGTTCAAACTTTCTATATGAATGAG
CCACAAAGTGCAACACAAGTTATGGTTGAGTCTTTTACTGACACACAAAATGACGAAGAT
GATGATGAACCTGATTATGCTGAAGTAGCAGAAATAGCTCCTGATCCACCATTTAAGGAC
TATGAAATTGTGATACCAACAGCAAACATTCCAAGTGATAGAACGTCACCGAAAATTTCA
GTTGTTTTGCCATACGAAGAATCATTTTTCATGTCTGAAGGATTTAAAGTTGGATCAAAT
GATAAAAGTGGTTGTTTTGAGTCACCATTAGGTTCTGCAAATTGTCTCAAGTCTACACTT
CGAATTTGTGCCTCTGGCAAACCTCTGTCTGGTCTTGGTCCACAACCACGAAGTCCTGAC
AAAGTCATTATTAGCCAACCAACTAGATCATCAAGTTCTTTACAGAGTCCATTATCAGAA
GATGAATTTATGCTGACTGATGAAGTTTTTAGTCCTGGCACTGTCAAAATTGAAATATCA
CCTGATAATGAAGGAAAGATGATGGACTTTAATTTCCAACAAAAATTTTCACGTGGTTCA
GACACTTCTATTGATGATATGCTATCTGCTTCTTTAAGCACACTTGATGATTCACAGCGT
AGAAGCAGTCTTGAACCTAGAAGACTGAGCAGTGGTTCATGCAAAAAATGTAGTGGTGGA
AGTCATTCAGAAGAAGAAACAAGTTCATTCGGTACTGATTTAGATGGAACTGTAAAAATG
GGAATTCCTGCAAGACGTTGCACTCACAGTTCTCACTCAGAAGACACTTCCATTGGATTA
AGTCTTTCAGAATGGTCAACTGGTACAAATACAGTTCGTCAATATGCAAATCTTTCAGGG
TCTGACAGCCTATCTGCAGTTTCAGGTGATCAATCTGGCTGTATAAAGAGCGAAAAATCT
AAGTCGAGTGTAAGTGGAATAAGCAAATCCACAGAAAGTCTTAACGAAAAAAGTATTAGC
CTTTCGTGCGGGAACAAACTTGCTTACTCATTTGATAACAATAATCATTCAAAGGAAGGA
AATTCCGATACAGATAAAATAACATCTTCAGGCACGAATGATGAATCGACTTTAACCCTT
ACTGAAATGGTTCAGAGTATGACATCAGAATGGTCAACGAGCACTAGTCAAACACTTGTA
GAACATGATTTTAATAAACAACAGCAACAAATTTTAGATCAAAAATTCATTGATAAAGGA
AAATCTTCTGTTGAATACATGCCTTTAAAACCTCCAAAAAATGTTAAAAGAACGCCCGGT
GTAATTAATCAAAACGACAAAGATAATTTGCCTGGCATTCATCAGACTGTTAACAAACCA
AGCACATCTATGGTTAAACCAGCTGTGACTGAAAAACCAATTATCACACGACTTCCTCCG
AAAATTGTTGACATGATTGAAAAACCAACATACGAAAAACCAAAAATAATGCCAAAACCG
AAAATTCCACCACCGCCTGTTGAAATTTTAGAAAAACCAGATTTGATTCCACTTGAAAAG
CAACCAAATAAAAGTCTTGATTTATCAGAATCTGAATCATATAGTGAAAAGTTATATAAT
CAAAGTGAAAAATTGACTGAACGTTATCAAAGTCAAGAATTCTCACCTTATACAGCAGCA
ACACCAGCTGCGAGCACCTCAAAATCACTGACAAAACATCACAGCTATGATGATAAAACG
CTATCAAAGTCACAAATCCGTGAATACAAATCATCAAAAGTACGTCAAAGTCAATCTTTT
CATGAACATTTGCTATCAAGCGATTTAAATAAAATTGAAGAGGAAAAGTTGAGTTCATCG
ACCACAACGCACACGAGCGAAACAAGTACTGAAAATTCCTCACCAATGTTCTATCGCCCT
GAGAAATTAATTAAATGTTCACCATACTATTCAAGCAGCTTAAGCAGTGATACACCTTCA
ATTCATCAAGCCATTCTCAAACCACCGAGAAAAATATCAATTCCAAAAACATTGCAAGCT
CAAAGTTCTAACGACACGGATAGCTCATTGGATTTTCATCAAATGGAAGCAGCACGTAAA
GGTTATCGAAAGAAGAAACAAATTCCATCAACTAAACGAATTAAAATGGATCGCACGACC
GATTACCTGGAGAGTTCAGAATGTTCCGACATTCCTGATATACATTCGAGTAGTTCAGAT
AATGCTCGTCGTTATCCGGACTTTGAAGAGGAGCCAGAAAATTTGCCAGAGGAGGATGAT
TATGGATTTAAAATTGATGGTTCATTTCCTAGTACATCGACGAAATTTGAAACACTTGAT
TTGTCAGAAGAAAATGTCGACGAAATGGGTTTCCCAAAATATGATAGATTGCGACACGTA
GCAAATTTACCACCGCAAAAGCCCGCTCGTCAGAAAAAGAAGACACAAGTAAAAGTTTCA
TACCCAAGCGTTCACCAATATTATGGTCAAGATAGTGGTAGTGGAACTGAAACTAAAGCC
GGTCTTTCTGATGATGTTTATTGCTCTAGTGAAGATAGTTTTGCAGCGGGTTTTATGAAA
CAAAAATTATCTTCAAGTAATAATTCTTATAAAACCATAGAGTTACCCTATCCAGATTTT
CTCTCAGATTGTGATGAAAATGAATCTGTTAATGGACAGTATAGCAAGAAAAATGACTCG
GAAAAGAGTTTTGACTCTGATGAGGAAGAGTTGAATTATCATGGTATAAACGGATCATTG
GATAGAAGAAGTGATCTAACATCACCATCTTTAAATAGATATGACTTGACCATTGGTTCA
GATAAATCGATGTCATATGACCTTGCAGAAGCAGAAAAAAATAATCAGAATAATACAATT
GGAATTATCACAGCAACATCACCGACATCAATTGGTATTACGCAAACAAACAGTATTGTC
AACACATTAGAAAGAAATGATACACTAAGGAAAAAATGGCCAACAGATAAAGCATATTAT
ATCAGTAAAGAAATTCTTATGACTGAGAGAACATATAGACGTGACTTGGATGTTATTAAT
GTGCGTTATAGAAAAATCTTGGCACCAGAAGACATTGAAAATCTCCAACCACTTTTTGAC
TATTTCGAATCTATGGTGCAACATCATTCAATTTTCTTACGAGACCTCGAACATCGCATA
GTTATGTGGGAATCACGAGGTGATGAAGTTAAAACACGCATTGGTGATGTAATGTTGAAA
AACATGGTTGTGTTACCAATTTATGAAGAGTACTTTGAGTATCATCGCGAAATTCTTCAG
CGACTTAATGACCTCTTCAATGCTGATGAACGTTTTCAACAGATATATAAAGATTTAGAG
CAAGAGAAGGTGTGCTATCTACCACTCTCGACATTCTTGCTAAAACCCTTGCATCGTTTA
TTGCATTATCAGAAGCTTCTTGAATTACTCCTTGAATATTATACCGATGAAAATGAGGAT
AAAACAGATGTACAGGGCTCATTAGTCATGCTCTCACGTACAAATGAGTTAATTAGAGAG
CAAATTGTTGAGACAGAAAACTTTGTTTTGCTCTGCGAAATTCAACGTGATTTGAGCGGT
TTTGATTGTTTAGTACAGGATGACAGAAAACTCATACGTCAGGGTTGTTTGTTGAAGCAT
TCACGTAGAGGATTGCAGCAACGTATGTTTTTCCTCTTTACTGATGTTTTGGTTTATGCA
AGCAAGCCACAATTTTTACAAACCTTCAAAGTACTTGGTCATGTTCCAGTCCGATCACTA
CTTACTGAAAATGGGGAACATAATAGTTTTACTATCTTCGCTGGTGGCATCAACTGGACT
TTGTCTGCTGGAACTACTTATGAGAAAACTATTTGGATGGAAGAATTACAGCAAGCAGCA
ACAAATCTTAAATATAAATCTCCACAACTTACTGGTTTTAGTGGAATTAAATGCTGCACA
TCATCTGAAGAAGGTTTAGAAATGTGTGGATTAAATGCAATGGCACCAACTAATATTAAA
ACTCCAGTTTCTCGCAATAATACCTCATTACATGTATGCTGGCACAGAGGAATAACTGTC
AGTCTAGAAGATCATATAAAATCATCTGAAAGTCAAATTTCAGGATATCTTTTGAGAAAA
TTCAAAAATTCATCAGGATGGCAAAAACTTTGGGTGGTCTTAACTCAGTTTTGTTTGTTC
TTCTACAAGAGCTATCAAGATGAAATTCCATTAGCATCATTGCCACTTCTTGGTTATTAC
GTTGGACCACCATCAGCTCAAGACGCAGTCCAAAAAGACTTTGTATTCAAATTATCATTC
AAAAATCACACATATTTCTTTAGAACAGAAAGTGAAATTAGTTATCAGCGATGGCTGGAA
AATTTAAAAGGCATTTGCATGAGTAATCAAAAATTTGTACGATCATAA
>g10146.t1 Gene=g10146 Length=4515
MSLNSLGTSNTNGLPSSRMTHSLSTPSGVDGSSAVTQHSRGGGKKLAIRVQMLDDSMTLF
QVQAKALGKVLFEQVCRQLNLLEADYFGLEYTESSSGTKYWLDLEKPLNRQVGFSLIDPL
LRFCVKFYANDPTQLEEEYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDYS
FEDYPDHTYLSSYRFVPQQDQTLQRKIMENHKKHIGQSPAEADLNLLETARRCELYGMKM
HAAKDHEGVPLNLSVAHFGIAVFQGITRINTFSWAKIRKLSFKRKKFLIKLHPEGYGYYK
DIVEFFFEGRNECKNFWKKCVENHGFFRCQAVQSAPRRKTRVLSRGSSFRYSGKTQKQII
EFVRENYVKRQTFQRSQSFRQGPLASKRSQSQNVVNTSISAHPLLPIETADWEARKQSLE
SKTPSQMKKEVDMEKTRQPATLTPYSQTTTTVVESYPMKLDNRRPSNQMDSSLSVSPAVT
TPLRNIINNAPEVGQVHALQGDRNLVNSARNYHSQIATTSPNYIHHNNTSTPVNLYQRHQ
RLVGLNNSMLETEASSTSHESIQGISHRYTQDQSMGHVTSARYSSTSAYSMSNAANLNNS
KFDVSTATDLSDEDIDNIIYSDINDLHKQQQKQQQQQISNSNSNANSNNNLNNTHTIQTQ
TSSEINTFERTARADDDEDDDEDDEIKPYVSRMSLQKMTAVTQPLIINTNDLYATIDRKT
KTKAIKPLLTTDDDIDYRNKSDMKMNAKNYSSEFIDNSIRNINNVLSNIENYQYQASLDY
SVNPPEGSLSGFDSQFRSTLASHSDHFLAYDNSFSRVNINTSNSLPRNTEMSCIESLDSY
DSHYLTHNNNTSMGNLENNTSLHYASLMKPENQITNYQREFSGSSIYTTLQAHDDYEDDD
VEYSKNYELKYKKPEYGFMTSEREFLTSDRIDSPITRYDDDFRRSNYETNRKFSMDLNED
FNLPETKVYSSSYPGTTYNTIDQHFKRTTYSQYEFNGSQDLSHDSYELLEKSDDDFYYKF
KHNTNDHHARSCSLDSGNFIPTDYESDEEKHGYGNSKYRSSFETKSRSAADIMNDIFLLD
DPRDLPKEKLCVKSDGSFYKHVKQAMGIRTSSQESQSEYYESKISKSSGSSKKSKDSVYH
TDSNKKNSRETLKSKSGSEYNPSSPEEIFLVGELLNRNNYEMPTTTAKKTKNIKKMLENS
SKNSSQDSRSDFKSASQSFDDGDDMQKVLSYENIARESVDSAGGYDSQVHFSTFPSNKSG
TTVKTSHVQSISLQNVEIERNVKTYSTFKAFSQSAKPPSIESYTPKKTHIWPEEIEGLET
EISGVERAKNYRKRSDGENNIFSFDKDKIESLTSSVDNENMIFDKPKKSPDYPLTPELLS
EFDKQKIESPNQKPKITSRKEELMAKTHFEEYNPKLMIDTKIQLPYPHTTVERTKSDPNS
LANRPRLTANSRRHTLMHQKSIDLTPADSSEDEYMYKQPPSAPPVFKNHPHFELPQKYDP
NMNFDITQNFLKDFEKRAQIPIKDDIPYVLHKRHIMNGTAASPNRFPKPKSPKSPKSPKS
PKSPKIDKATADPKGSQDFLFTKNIDLSKVDINTLEQKEPTTTVNLSSPKHHKDITKHLD
PKSLEALNNKLSQIESDSATSSKTDTHPTKAKPPVPIAHKIDPATIKKEAVLSGKRAVKP
RSGQIKNKNNLKTRSKAKTRITSFSSDDESIDSDDVFGSAEAMPTKMEFSPPQSRKEMEP
ILKHEHSRISQAAWARGQTMSSTEVEGSPPQVRKLADLENRYHTHKLDTNFMTSSELRRI
SERSISIPSSEEDANGSTLKCELATEIYRTTENLAEIEDEEEQIKIDEPEEQKQIAKVEP
IPKSKAKILEELIDSSMIIRSKGHAPILFAHARLNLSEGSAFASLQRQSAQELPGGERRA
KSLDAPVISLHRLPPMNAFSSKDDTVAFEEEAETLEVKKLDSTKEDEVESQDFLICDKMQ
SPLEPKIQPETIESTVVIENDELELLDRLKYIEKITLQGVKIKEKRKSRTQLKSGNQLIL
EIPKYKFEPFSSGNSSLKTSPAVSRASSTERSSSKNKNEASPTNMAKKPPVKPDRGDVKR
SPKSSKNLGDKLKVPGDSLQKAGTKERSKSLEKVTPKHFSVKGRKSITEETELEKLKRKE
RQQKLYESAMKQTINMLSPVKDQLPTFPVVEDKISVKKEGDKIIIDAEIKSKPEDHVLIA
KSPRKLDSTLAKFSRSCEEGKSIEKLDKANRSFEDRHKSFEDSEKSDKSQNEDAEQKNML
AKKEELKREIEGAVVHKKIQGKSRSLEKKQEQTSFVEARNKTKSLDNYFDAIEPTFKKDL
AKLNQEVKDAKEVIANKKEATQKKAKDDKNVTKSSSVDKVTQQQQAKHHIDKRAISYPEN
HNDVDMQAIISERRNLDFMKRKSEMDEESSLTSVTDVKTESMDNYFFTRIPTISCEEPSI
EEEDFEEMEANDEQNIQESPKTNESETPSSTSKNSDDIKKKFDIDDLSDLTKCTDEKSKQ
EQLLYQAQAANRRNFLKLSIEKSKSSDSSIDREKDPLKPERQDSSTSYSNKEKSSLEEES
SVSCSIAKPLGISEDFIDPNEQMRCRELFDAMMKLEKIEEESKLPKKASPTLEKQFPIDL
GSGSELDYTDPVEDRISKILERKDTDIRPIKPKIQKPPRDLSSHKKVTRAIPLEDLSQPP
EQLQAKLNTAHKYLNATHSGSSLESKSSVESKSSLSVDRESYETESSSGSLGKAHKRGEL
AQKQLQSTFKSFPIESSGSSQEDPNWHPDHETYEKFEVIESPSDRDTGTDEHTKESDSDY
QDDTAELQQQYASYSSETSSQSTLNPLGALGYGTGFAIGRTLSRISERSTNSEKSSNEEE
KTSIDEDISAHEEEEHSVASSDHQASMSSEIHSNSHQAYISDTDRRTSAEMPDIPCDTAA
AERLAELYYKSNMTKTGRFSVSNVEDKDKHRLKTEVLAGSGSSQESEDWPLPEIPIEQQQ
KEQESCIFKNSNKPVPKTFCWRNSTSGIQSQDSEIWPSPPSSVIEAPPLIENVQTFYMNE
PQSATQVMVESFTDTQNDEDDDEPDYAEVAEIAPDPPFKDYEIVIPTANIPSDRTSPKIS
VVLPYEESFFMSEGFKVGSNDKSGCFESPLGSANCLKSTLRICASGKPLSGLGPQPRSPD
KVIISQPTRSSSSLQSPLSEDEFMLTDEVFSPGTVKIEISPDNEGKMMDFNFQQKFSRGS
DTSIDDMLSASLSTLDDSQRRSSLEPRRLSSGSCKKCSGGSHSEEETSSFGTDLDGTVKM
GIPARRCTHSSHSEDTSIGLSLSEWSTGTNTVRQYANLSGSDSLSAVSGDQSGCIKSEKS
KSSVSGISKSTESLNEKSISLSCGNKLAYSFDNNNHSKEGNSDTDKITSSGTNDESTLTL
TEMVQSMTSEWSTSTSQTLVEHDFNKQQQQILDQKFIDKGKSSVEYMPLKPPKNVKRTPG
VINQNDKDNLPGIHQTVNKPSTSMVKPAVTEKPIITRLPPKIVDMIEKPTYEKPKIMPKP
KIPPPPVEILEKPDLIPLEKQPNKSLDLSESESYSEKLYNQSEKLTERYQSQEFSPYTAA
TPAASTSKSLTKHHSYDDKTLSKSQIREYKSSKVRQSQSFHEHLLSSDLNKIEEEKLSSS
TTTHTSETSTENSSPMFYRPEKLIKCSPYYSSSLSSDTPSIHQAILKPPRKISIPKTLQA
QSSNDTDSSLDFHQMEAARKGYRKKKQIPSTKRIKMDRTTDYLESSECSDIPDIHSSSSD
NARRYPDFEEEPENLPEEDDYGFKIDGSFPSTSTKFETLDLSEENVDEMGFPKYDRLRHV
ANLPPQKPARQKKKTQVKVSYPSVHQYYGQDSGSGTETKAGLSDDVYCSSEDSFAAGFMK
QKLSSSNNSYKTIELPYPDFLSDCDENESVNGQYSKKNDSEKSFDSDEEELNYHGINGSL
DRRSDLTSPSLNRYDLTIGSDKSMSYDLAEAEKNNQNNTIGIITATSPTSIGITQTNSIV
NTLERNDTLRKKWPTDKAYYISKEILMTERTYRRDLDVINVRYRKILAPEDIENLQPLFD
YFESMVQHHSIFLRDLEHRIVMWESRGDEVKTRIGDVMLKNMVVLPIYEEYFEYHREILQ
RLNDLFNADERFQQIYKDLEQEKVCYLPLSTFLLKPLHRLLHYQKLLELLLEYYTDENED
KTDVQGSLVMLSRTNELIREQIVETENFVLLCEIQRDLSGFDCLVQDDRKLIRQGCLLKH
SRRGLQQRMFFLFTDVLVYASKPQFLQTFKVLGHVPVRSLLTENGEHNSFTIFAGGINWT
LSAGTTYEKTIWMEELQQAATNLKYKSPQLTGFSGIKCCTSSEEGLEMCGLNAMAPTNIK
TPVSRNNTSLHVCWHRGITVSLEDHIKSSESQISGYLLRKFKNSSGWQKLWVVLTQFCLF
FYKSYQDEIPLASLPLLGYYVGPPSAQDAVQKDFVFKLSFKNHTYFFRTESEISYQRWLE
NLKGICMSNQKFVRS
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 35 | g10146.t1 | CDD | cd17098 | FERM_F1_FARP1_like | 46 | 132 | 4.05488E-40 |
| 31 | g10146.t1 | CDD | cd14473 | FERM_B-lobe | 140 | 233 | 6.59883E-26 |
| 33 | g10146.t1 | CDD | cd13193 | FERM_C_FARP1-like | 228 | 349 | 3.91578E-79 |
| 34 | g10146.t1 | CDD | cd00160 | RhoGEF | 4039 | 4184 | 4.15373E-23 |
| 32 | g10146.t1 | CDD | cd13235 | PH2_FARP1-like | 4409 | 4503 | 2.8179E-55 |
| 28 | g10146.t1 | Coils | Coil | Coil | 2269 | 2289 | - |
| 30 | g10146.t1 | Coils | Coil | Coil | 2340 | 2363 | - |
| 29 | g10146.t1 | Coils | Coil | Coil | 4515 | 4515 | - |
| 23 | g10146.t1 | Gene3D | G3DSA:3.10.20.90 | - | 44 | 126 | 1.1E-21 |
| 27 | g10146.t1 | Gene3D | G3DSA:1.20.80.10 | - | 127 | 235 | 3.7E-35 |
| 24 | g10146.t1 | Gene3D | G3DSA:2.30.29.30 | - | 236 | 328 | 2.9E-33 |
| 26 | g10146.t1 | Gene3D | G3DSA:1.20.900.10 | - | 4029 | 4231 | 1.2E-28 |
| 25 | g10146.t1 | Gene3D | G3DSA:2.30.29.30 | - | 4409 | 4508 | 6.9E-24 |
| 55 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - |
| 76 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - |
| 48 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 438 | - |
| 66 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 436 | - |
| 56 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 684 | - |
| 88 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 668 | - |
| 58 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1127 | - |
| 85 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1164 | - |
| 69 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1128 | 1153 | - |
| 50 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1197 | 1219 | - |
| 51 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1197 | 1213 | - |
| 67 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1538 | 1577 | - |
| 90 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1600 | 1621 | - |
| 65 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2053 | 2083 | - |
| 75 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2053 | 2145 | - |
| 72 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2090 | 2107 | - |
| 47 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2120 | 2145 | - |
| 70 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2233 | 2316 | - |
| 89 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2233 | 2318 | - |
| 73 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2358 | 2400 | - |
| 79 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2358 | 2374 | - |
| 64 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2384 | 2399 | - |
| 62 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2456 | 2501 | - |
| 80 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2457 | 2473 | - |
| 57 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2475 | 2492 | - |
| 43 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2538 | 2584 | - |
| 59 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2538 | 2578 | - |
| 46 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2663 | 2844 | - |
| 74 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2663 | 2691 | - |
| 68 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2701 | 2749 | - |
| 63 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2761 | 2783 | - |
| 61 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2784 | 2821 | - |
| 53 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2823 | 2844 | - |
| 81 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2863 | 2934 | - |
| 82 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2871 | 2900 | - |
| 87 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2901 | 2924 | - |
| 52 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3255 | 3295 | - |
| 71 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3255 | 3294 | - |
| 78 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3393 | 3414 | - |
| 86 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3468 | 3492 | - |
| 77 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3478 | 3492 | - |
| 49 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3530 | 3677 | - |
| 54 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3536 | 3551 | - |
| 84 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3567 | 3610 | - |
| 44 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3611 | 3637 | - |
| 45 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3646 | 3660 | - |
| 83 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3661 | 3676 | - |
| 60 | g10146.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3776 | 3796 | - |
| 9 | g10146.t1 | PANTHER | PTHR45858 | FERM DOMAIN CONTAINING PROTEIN | 7 | 699 | 0.0 |
| 12 | g10146.t1 | PANTHER | PTHR45858:SF5 | CHONDROCYTE-DERIVED EZRIN-LIKE DOMAIN CONTAINING PROTEIN, ISOFORM G | 7 | 699 | 0.0 |
| 7 | g10146.t1 | PANTHER | PTHR45858 | FERM DOMAIN CONTAINING PROTEIN | 926 | 3699 | 0.0 |
| 10 | g10146.t1 | PANTHER | PTHR45858:SF5 | CHONDROCYTE-DERIVED EZRIN-LIKE DOMAIN CONTAINING PROTEIN, ISOFORM G | 926 | 3699 | 0.0 |
| 8 | g10146.t1 | PANTHER | PTHR45858 | FERM DOMAIN CONTAINING PROTEIN | 3757 | 4506 | 0.0 |
| 11 | g10146.t1 | PANTHER | PTHR45858:SF5 | CHONDROCYTE-DERIVED EZRIN-LIKE DOMAIN CONTAINING PROTEIN, ISOFORM G | 3757 | 4506 | 0.0 |
| 15 | g10146.t1 | PRINTS | PR00935 | Band 4.1 protein family signature | 79 | 91 | 1.0E-14 |
| 13 | g10146.t1 | PRINTS | PR00935 | Band 4.1 protein family signature | 146 | 159 | 1.0E-14 |
| 14 | g10146.t1 | PRINTS | PR00935 | Band 4.1 protein family signature | 159 | 179 | 1.0E-14 |
| 16 | g10146.t1 | PRINTS | PR00935 | Band 4.1 protein family signature | 221 | 237 | 1.0E-14 |
| 6 | g10146.t1 | Pfam | PF09379 | FERM N-terminal domain | 50 | 112 | 1.8E-18 |
| 4 | g10146.t1 | Pfam | PF00373 | FERM central domain | 132 | 241 | 1.1E-14 |
| 2 | g10146.t1 | Pfam | PF09380 | FERM C-terminal PH-like domain | 245 | 331 | 5.3E-21 |
| 1 | g10146.t1 | Pfam | PF08736 | FERM adjacent (FA) | 342 | 381 | 1.1E-11 |
| 3 | g10146.t1 | Pfam | PF00621 | RhoGEF domain | 4042 | 4217 | 5.1E-24 |
| 5 | g10146.t1 | Pfam | PF00169 | PH domain | 4413 | 4506 | 6.4E-12 |
| 42 | g10146.t1 | ProSitePatterns | PS00660 | FERM domain signature 1. | 101 | 131 | - |
| 92 | g10146.t1 | ProSiteProfiles | PS50057 | FERM domain profile. | 46 | 331 | 76.596 |
| 91 | g10146.t1 | ProSiteProfiles | PS50010 | Dbl homology (DH) domain profile. | 4037 | 4221 | 26.175 |
| 94 | g10146.t1 | ProSiteProfiles | PS50003 | PH domain profile. | 4250 | 4341 | 10.351 |
| 93 | g10146.t1 | ProSiteProfiles | PS50003 | PH domain profile. | 4410 | 4507 | 13.733 |
| 41 | g10146.t1 | SMART | SM00295 | B41_5 | 42 | 241 | 2.3E-57 |
| 39 | g10146.t1 | SMART | SM01196 | FERM_C_3 | 245 | 335 | 3.0E-33 |
| 40 | g10146.t1 | SMART | SM01195 | FA_2 | 340 | 386 | 3.3E-15 |
| 36 | g10146.t1 | SMART | SM00325 | RhoGEF_3 | 4041 | 4220 | 1.4E-18 |
| 37 | g10146.t1 | SMART | SM00233 | PH_update | 4251 | 4343 | 7.1E-9 |
| 38 | g10146.t1 | SMART | SM00233 | PH_update | 4411 | 4509 | 5.6E-16 |
| 21 | g10146.t1 | SUPERFAMILY | SSF54236 | Ubiquitin-like | 48 | 129 | 8.47E-20 |
| 22 | g10146.t1 | SUPERFAMILY | SSF47031 | Second domain of FERM | 131 | 236 | 4.58E-30 |
| 18 | g10146.t1 | SUPERFAMILY | SSF50729 | PH domain-like | 234 | 379 | 1.35E-37 |
| 20 | g10146.t1 | SUPERFAMILY | SSF48065 | DBL homology domain (DH-domain) | 4030 | 4241 | 6.94E-35 |
| 19 | g10146.t1 | SUPERFAMILY | SSF50729 | PH domain-like | 4228 | 4342 | 2.83E-20 |
| 17 | g10146.t1 | SUPERFAMILY | SSF50729 | PH domain-like | 4382 | 4505 | 1.76E-27 |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005856 | cytoskeleton | CC |
| GO:0005085 | guanyl-nucleotide exchange factor activity | MF |
KEGG
Orthology
- This transcript has been annotated with K06082 (FERM, RhoGEF and pleckstrin domain protein 2)
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
