General information for g14167.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Fatty acid synthase.
Parent gene
- The parent gene g14167 is located on chr_1: 35149715..35156349 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_1 | g14167 | g14167.t1 | isoform | g14167.t1 | 35149715 | 35156349 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon1 | 35149715 | 35150142 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS1 | 35149715 | 35150142 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon2 | 35150200 | 35150330 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS2 | 35150200 | 35150330 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon3 | 35150417 | 35150489 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS3 | 35150417 | 35150489 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon4 | 35150551 | 35155039 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS4 | 35150551 | 35155039 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon5 | 35155098 | 35155447 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS5 | 35155098 | 35155447 |
| chr_1 | g14167 | g14167.t1 | exon | g14167.t1.exon6 | 35155506 | 35156349 |
| chr_1 | g14167 | g14167.t1 | cds | g14167.t1.CDS6 | 35155506 | 35156349 |
| chr_1 | g14167 | g14167.t1 | TSS | g14167.t1 | NA | NA |
| chr_1 | g14167 | g14167.t1 | TTS | g14167.t1 | NA | NA |
Sequences
>g14167.t1 Gene=g14167 Length=6315
ATGAGTTTTTCTTTAAATGAAAAAGAAGATGATGTGGTTGTGACTGGTATATCAGGTCGA
CTTCCAAAATCTCGTAATGTGAAAGAATTCGCATCGAATTTGTTCAATAAAGTTGATTTG
ACTGATGATACTGAAGAACGTTGGAATTATATCAGTGATTATGTTCCACGTCGATTTGGG
AAAATTTCCGATCTTGACAAATTCGATGCATCGTTTTTCTCAATGTTGAATAGTCAAGCT
AAATATACAGATCCGCAAATGAGAATTTTACTTGAACATGCTTATGAAGCAATTTTAGAT
GCTGGCATTAGTCCTCAAACGTTGATTGGAAGTAATACTGGTGTTTATATAGGATGTTGC
ACTTCAGATTCGAAAGATATTTATATGAGTCAAGCTTCGGTTGCACCTTATGGTGCTGTT
ACTGTAGGAAATGCTCTATTTTTTCTATCCAATCGTCTTTCATACACTCTAGGATTATGC
GGACCTTCTTTGACACTTGACACTGCTTGCTCAAGTTCTGGTTATGCTCTTGATCATGCA
TTTCATGATTTAAATTCAGGTGTTTGTGATTTTGCAATTGTTGCTGGTTCTCAATTATCT
CTATTGCCTTATATGTTCTATGAATATACAGCCATTGGTGTTTTATCTGAAAGTGGAATT
TCCAGACCTTTTGATGTTGATGCAAATGGACTTGTTCGTGCTGAAGCAATTTGTGTTGCT
TTTCTGCAGAAGCGTAAAAATGCTAAGCGAATTTATGCTCAAATTCTTCATTCTTTATCA
AATAATGATGGTTTCAAGAAAGAAGGACCTGTTTTGCCCTCAAAAGAAATGCAACAAAAT
TTAATGGAAAAAGTTTACAGAAATTTAAAATTTGAGCCTTCACAGTTGAAAATTGTTGAA
GCTCATTCAACTAGCACACAGCTTGGTGATTTTCAAGAAGTTTCAGCTATTGATGCAGTT
TTTTGTAAGAATCGTTCAGATAAATTGATTATTGGCAGTGTTAAGTCTAATTGCGGACAT
GCTGAAGCTGCATCAGGCATGACATCAATGTTTAAAGTTTTAATTGCTTTGGATCAAGGA
AAATTTGCTCCAAATATTAATTTGACAAAACTTCGTAAAGATATCCCAGCATTTGCTGAA
GATCGAATTGAAGTTGCAACTGAAATAATTGAGCTCACATCGCCTTATATTGCAATGAAT
AGTTTCGGTATTGGTGGCTCAAATGCTCACATTTTGTTTAAGCAGCATTCAAAAGTTAAA
GATATTTTAAAATTACCTACAAGTAATCTTGAATATATGGTTCTATGGTCAGGTAGAACG
GAAGATGCTGTTCATAATATATTTGATGAAATTTCAAATAAACCACTGGATGTTGAGTTT
TTAGCTTTACTTAATAACACTCAAATGAAAACACCTGATGCAAATTCTTATCGTGGTTAC
GCATTGTTTAAGAATGATGATGAAGGGAAAGCAATTTGCATCAACCGTAATTTGCAACAT
TTTGATGGAGTTCGTCGACAAATTGTATTTTCATATGCGGGTATGGGAACTCAATGGTTT
AAAATGGGACAAGATCTGATGCAAATTCCACTTTTTGCTGAATCAATTGAAAAATGTCAT
AATATTTTGAAGAAATTTGATGTAGATTTGAAAGCTATTATAACTTCAACTGATTCGAAT
ATTTATGAAAACTTTTTGAATTCATCTTTAGGAATAATATCAATAGAAATTGCTTTAACT
GACATTTTGGATGCTTTGAATATAAAACCTGACTGGATAATTGGTCATTCATTTGGTGAG
ATTTGTTGCTCATATGTTGATGGTTGTTTCACTAGAGAAGAAGCTTTGATAACTGCTTAT
CTTAGAGCTAAAATAACTCTTGACTCAGGTATACAAGGTGGCAGTATGGCAGCAATTGGA
ATGCATCATAGTGAACTTGAAAAGATCATACCAAAAGAAATTGATATTGCTTGTCAGAAT
AGTAAAGAATTGACAACAATTAGTGGACCAAAGAAGGCAGTTGCTGATTTTGTCGATTAT
TTGAAATCTCAACATTGTTTTGCCAAAGAAGTCGCTTGTGCCGGTGTTCCATTTCATAGT
CGATATATTAAAGAAGTTGGTGTAAAGTTCCGTGCAGAACTAGCAAAAATAATTATAAAT
CCTAAAATTCGTTCTTCAAATTGGATTACAGCAACATATCCTGAAGAATGTATTGAAAGC
AAGTTTTGTAATGCAAGTTATCATGCTTCTAATTATATGAATCCAGTTTATTATGAACAT
GCAGCCAAAACACTACCACAAAATGCTCTTACAATCGAAATTTCACCTCATGGTTTTCTA
CAATCACTTTTAAAATCAGCTTTAAAAAAAAGTGTTTATGTTACTCTAACTAATAAAAAT
AAAAAAGATGGAAAAGCATTTTTTATGGAAGGAATTGGGAAAATCTTTCAATGCGGTGTT
GATTTTGATATTAACAAACTTTATCCAACTATTGAGTTTCCAGTTTCAAGAGGAACTTCA
ATGATTTCACCATTGATTAAATGGAATCACAGAACAAGCCATTTTGTTCCATCTTACGAT
TCAATTTATGTTCATGGACGTCAAAAACTTATAATAAATTTTAAAGATAAGGAATATAGG
TTTTTAAAAAATCATAAAATTGATGAAAAACCTGTTATAGCTGCAGCATTTTGGATTTTA
ATAGCATGGAAAAGTATTTCTCTCATGTATGGAAAACATTATGAAAATATGAGAGTAGCA
ATAAGAGAGATAGAAATATTACGAGCTACATATATTCCACCAAATGATGAAATGGTTTTA
ACTACAATTATTAACAGTGCAAATGGAAAATTAGAATTAATGGAAGGAGATAAGCACATG
ATTGCACAAGGTTTCATCGAAAAAATTGATGATTTACATATTGACAAAGTTAAAGACAAA
CCTTATGGGAAAAATACTGTAATTTTAAGTACAAATGATTTCTATAAGCATGCTCGTGTT
CTTGGTTATCATTATATAAATGAATTTCAACAAATACACGAAATAACTGATGATGGCTTG
CAAGGAAAAATTAAATGGAACAAAAACTGGACAAGTTTCATTGATTGCGTTTTTCAAAGT
ATTCTTTTGAGCTTAAAGTTTGATAAACTCGAATTGCCTATCAAAGTTAAGAAACTTTCA
ATTGATCCATTTTTGCAAAGAGAAATAATTCAAGAAAAAATGAAAAGCATTGTACTATCA
AATGATAATGAAGAATCAGAAATTTTACTTCCATTTGAAACAGATAATGATATAAATGTG
ACAAGATGTGCTGGAATTGAAATTCATGAACCATTTTCTATAACGGTTAATCGTAAAACT
CAAAAGAATATTCTCTTAGAAAGCTCACAATTCATACCATATTTAAATTCCCAAAAGACT
TTTGAATTTTTTGATGCAATAAAATGTTTATTTCAAATATATTTTGATAATAATCAAAAA
TTCAATTATAAAGTTATTGAAATCAATAGTGATGAAAATGAAACTGAGTTTGCTTTAGAA
ACAGTTGCAAAGATAAGCAAGCTGTATCCAATATCTTTTGATGCAAAGCTTTTAACACCA
AAGATGGTTGATAATATTGATGCTGAAGTGATTGTAGATGGAAATATTTCTTCATTCAAA
CATAATGACATTATTTATGTTAAGAATTGTTTACAAAATGAGGAAATGATTGAAAAAATT
TATGAAGCATTAACAACAACTGGAGTTTTAGTTACACAAGAAAATCAAAAGACAGCAATT
CTAACAGAAAAGTTTGAAATAATTTCTTATTATAAATTAAATAATGAAAATGGGATTTTT
ATGTTAAGTAAAAAGCAGAAGAAAATTGAAACGAAAGCAAAAATTATTGAAATAACTTCA
AATGTTGAAGATTGGATTGAAGATTTAAAACAAGAATTACAGAAAATGACAGAAGAAAAT
ACTGAAATGTTATATGATAGTTTTATCTTACATTCAAATAATTCTAAATATTATTCAGGT
CTCCTTGGTTTTTACAATTGTATTCGTTTAGAGCATCCAACAATTCAGTGGAAATGCTTT
TTAATTGATGATGAAAGTGCTCCAAAATTTGATATTATAAATGAATTTTACAACAAACAG
TTGTCTAAGAATTTAACTATAAATATCTTCAAAAATGGTCAATGGGGTTGTTATCAATTT
CTAAATATTCAGGAAAATAATAAACTAGAGCCATTTAAAGGTCATTGTTTTGCAAATTAT
ACTGAAAGTGGAAATCTCTCAACTCTTAAATGGCGAAATGGTGCATTGAAAAGTTTGTCA
TTAGATACGTGCAGTGATGATTTAATTAAAATTCAATATGCAGCATTAAATTTTAAAGAT
ATTGCTTTTGCCTATGGATATTTACCTGATGAAGTGACTCTTATTAATGAATGTCCAATG
GGTTTTGAATTTTCTGGTATTCATGTTAAAACTGGAGAACGTGTATTTGGACTTTCTTTT
AGTGGATCTTCAATTGCTTCTTACTTAGAAAATCCTTACAACATATTCCTCAAGAAAGAT
GGATTATGGAAAAGAATTGAAAATCTTCGCTGTCTTTTGTTCACTATTAGAGATAATTGG
ACTTTAGAAGATGCTGCCACAATTTTTGTAGCTTATTTAACAGTTTATTATGCATATTTT
GTATCAACAAAAATTGAAAAAGGCAAATCTATTTTGATTCACAGTGGAGCTGGCGGTGTC
GGTTTAGCAGCTATTCATGTTGCTTTTGCCTATGGTCTTGAAGTATTTACAACTGTTGGA
AATGAGGATAAGAGAAAATTTTTACTTGAAACATTTCCACAGTTGAAACCTCAAAATATT
GGAAATTCAAGAGATACAAGTTTCTATAAAATGGTCATGAAAGAAACAAAAGGCAGAGGT
GTCGATTATGTGTTGAATTCACTTTTTAATGATAAAATGCTTGCATCTGTTAAATGTCTA
GCAAAATATGCCGTAATGTTGGAAATCGGTATAGCAGACATTCTTAAAGGAACAAAAATT
GATTTAAAACATCTCGAAAAATTTGCAACAATCCGATGGGTTAAAATTGATCAAGTTGAT
TATTCGAGTTCAGAAGCAATTGGTGTAATTGAACTTCTTTATAAAGATATACAATTAGGA
ATTGTAAAACCATTAAGCAGAACAGTTTTTGTAGCTAAAGATCTAACAAAAGCTTTTCAA
TTCATGTCTACTGGCAATCACATTGGTAAAATTTTAATTAAAATCCGTGAAAATGAAAAT
GATGAAGCAACACTTCCAATTAATGTCATACCAAGATTTTATTGTAATTCTGAATATTCT
TACATCATTGTCGGTGGTCTTGGTGGACTTGGTTTAGAATTTTCACAGTGGTTGATTAGC
AGAAAATGCCGTAAATTGGTATTAAGCTCAAGTCGTGGAATCAGTAATCAATATCAAGCA
TTTAAAATCAAACATTGGAAATCATTTGGAGTTGAAATAATTGTCAATACTTCTGATATT
ACAACAGCAAAAGGATGCAAAGAGCTTATAAAAACTGGTGATAAATTGGGTTCAGTTGGA
GGAATTTTTAATTTTGCTGTTGTGCTTAATGATGGAGTTCTTTTGAATCAAACATCAGAA
ACATTTAATCGCGTACTGGCACCAAAAGCAATCGCTACAAAGCACTTACACGAGCAATCA
TTAAAACTTTGTCCAAAATTAAAACATTTCGTTGTTTATTCAAGTATTTCATGTGGCAGA
GGTATTCCAGGTCAAACCAATTATGGAATGGCTAATTCTGTAATGGAAAGAATCATTGAA
AAGCGACATTCGATGGGATTGCCAGCTAAAGCTATTCAATTAGGTCCAATTGGTGATGTC
GGAGCATTTGCTGATAGAGAAACTAAGATAAAAGGACAGGAAAAAATTAAAATTTCAATT
CAATCAATTGCTTCAATGCTTGAGCATCATGATGCTATGCTTTTAAATCATGAACCAATA
ATTTCATGTACAGGAACTTTGAAGAAAAAAGAAATTTCTATAGAAAAAGATGGATTTATT
GATATGCTAATGAGAGTTTTAAATATTGAGGATCGAAAATCAATTTCAATGAATTCGACT
TTTTCTCAATTAGGCATTGATTCTTTAGGTGGTGTTGAAATTTTGCAAATGATTGAACGA
GAATATGGAGTAACTTTGACATCAAGTGAACTCAGATCATTGACAATCACAGAACTTGAA
ACAAAAGTTATGGCAAATTCTAAATTAGCTGAAATAGAAGATGAGAAAGTTGATTATGAT
GCAATGGATATTTAA
>g14167.t1 Gene=g14167 Length=2104
MSFSLNEKEDDVVVTGISGRLPKSRNVKEFASNLFNKVDLTDDTEERWNYISDYVPRRFG
KISDLDKFDASFFSMLNSQAKYTDPQMRILLEHAYEAILDAGISPQTLIGSNTGVYIGCC
TSDSKDIYMSQASVAPYGAVTVGNALFFLSNRLSYTLGLCGPSLTLDTACSSSGYALDHA
FHDLNSGVCDFAIVAGSQLSLLPYMFYEYTAIGVLSESGISRPFDVDANGLVRAEAICVA
FLQKRKNAKRIYAQILHSLSNNDGFKKEGPVLPSKEMQQNLMEKVYRNLKFEPSQLKIVE
AHSTSTQLGDFQEVSAIDAVFCKNRSDKLIIGSVKSNCGHAEAASGMTSMFKVLIALDQG
KFAPNINLTKLRKDIPAFAEDRIEVATEIIELTSPYIAMNSFGIGGSNAHILFKQHSKVK
DILKLPTSNLEYMVLWSGRTEDAVHNIFDEISNKPLDVEFLALLNNTQMKTPDANSYRGY
ALFKNDDEGKAICINRNLQHFDGVRRQIVFSYAGMGTQWFKMGQDLMQIPLFAESIEKCH
NILKKFDVDLKAIITSTDSNIYENFLNSSLGIISIEIALTDILDALNIKPDWIIGHSFGE
ICCSYVDGCFTREEALITAYLRAKITLDSGIQGGSMAAIGMHHSELEKIIPKEIDIACQN
SKELTTISGPKKAVADFVDYLKSQHCFAKEVACAGVPFHSRYIKEVGVKFRAELAKIIIN
PKIRSSNWITATYPEECIESKFCNASYHASNYMNPVYYEHAAKTLPQNALTIEISPHGFL
QSLLKSALKKSVYVTLTNKNKKDGKAFFMEGIGKIFQCGVDFDINKLYPTIEFPVSRGTS
MISPLIKWNHRTSHFVPSYDSIYVHGRQKLIINFKDKEYRFLKNHKIDEKPVIAAAFWIL
IAWKSISLMYGKHYENMRVAIREIEILRATYIPPNDEMVLTTIINSANGKLELMEGDKHM
IAQGFIEKIDDLHIDKVKDKPYGKNTVILSTNDFYKHARVLGYHYINEFQQIHEITDDGL
QGKIKWNKNWTSFIDCVFQSILLSLKFDKLELPIKVKKLSIDPFLQREIIQEKMKSIVLS
NDNEESEILLPFETDNDINVTRCAGIEIHEPFSITVNRKTQKNILLESSQFIPYLNSQKT
FEFFDAIKCLFQIYFDNNQKFNYKVIEINSDENETEFALETVAKISKLYPISFDAKLLTP
KMVDNIDAEVIVDGNISSFKHNDIIYVKNCLQNEEMIEKIYEALTTTGVLVTQENQKTAI
LTEKFEIISYYKLNNENGIFMLSKKQKKIETKAKIIEITSNVEDWIEDLKQELQKMTEEN
TEMLYDSFILHSNNSKYYSGLLGFYNCIRLEHPTIQWKCFLIDDESAPKFDIINEFYNKQ
LSKNLTINIFKNGQWGCYQFLNIQENNKLEPFKGHCFANYTESGNLSTLKWRNGALKSLS
LDTCSDDLIKIQYAALNFKDIAFAYGYLPDEVTLINECPMGFEFSGIHVKTGERVFGLSF
SGSSIASYLENPYNIFLKKDGLWKRIENLRCLLFTIRDNWTLEDAATIFVAYLTVYYAYF
VSTKIEKGKSILIHSGAGGVGLAAIHVAFAYGLEVFTTVGNEDKRKFLLETFPQLKPQNI
GNSRDTSFYKMVMKETKGRGVDYVLNSLFNDKMLASVKCLAKYAVMLEIGIADILKGTKI
DLKHLEKFATIRWVKIDQVDYSSSEAIGVIELLYKDIQLGIVKPLSRTVFVAKDLTKAFQ
FMSTGNHIGKILIKIRENENDEATLPINVIPRFYCNSEYSYIIVGGLGGLGLEFSQWLIS
RKCRKLVLSSSRGISNQYQAFKIKHWKSFGVEIIVNTSDITTAKGCKELIKTGDKLGSVG
GIFNFAVVLNDGVLLNQTSETFNRVLAPKAIATKHLHEQSLKLCPKLKHFVVYSSISCGR
GIPGQTNYGMANSVMERIIEKRHSMGLPAKAIQLGPIGDVGAFADRETKIKGQEKIKISI
QSIASMLEHHDAMLLNHEPIISCTGTLKKKEISIEKDGFIDMLMRVLNIEDRKSISMNST
FSQLGIDSLGGVEILQMIEREYGVTLTSSELRSLTITELETKVMANSKLAEIEDEKVDYD
AMDI
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 32 | g14167.t1 | CDD | cd00833 | PKS | 10 | 412 | 4.56769E-133 |
| 33 | g14167.t1 | CDD | cd05195 | enoyl_red | 1449 | 1753 | 1.20045E-82 |
| 31 | g14167.t1 | CDD | cd08954 | KR_1_FAS_SDR_x | 1681 | 2000 | 1.59594E-55 |
| 25 | g14167.t1 | Coils | Coil | Coil | 1299 | 1326 | - |
| 21 | g14167.t1 | Gene3D | G3DSA:3.40.47.10 | - | 9 | 414 | 1.3E-125 |
| 19 | g14167.t1 | Gene3D | G3DSA:3.30.70.3290 | - | 431 | 854 | 1.1E-146 |
| 24 | g14167.t1 | Gene3D | G3DSA:3.40.366.10 | - | 504 | 819 | 1.1E-146 |
| 20 | g14167.t1 | Gene3D | G3DSA:3.10.129.110 | - | 869 | 1122 | 3.6E-43 |
| 18 | g14167.t1 | Gene3D | G3DSA:3.40.50.720 | - | 1304 | 2003 | 1.0E-220 |
| 23 | g14167.t1 | Gene3D | G3DSA:3.90.180.10 | - | 1405 | 1773 | 1.0E-220 |
| 22 | g14167.t1 | Gene3D | G3DSA:1.10.1200.10 | - | 2015 | 2094 | 4.5E-14 |
| 9 | g14167.t1 | PANTHER | PTHR43775 | FATTY ACID SYNTHASE | 7 | 2084 | 0.0 |
| 10 | g14167.t1 | PANTHER | PTHR43775:SF23 | FATTY ACID SYNTHASE 3 | 7 | 2084 | 0.0 |
| 4 | g14167.t1 | Pfam | PF00109 | Beta-ketoacyl synthase, N-terminal domain | 10 | 247 | 1.7E-53 |
| 1 | g14167.t1 | Pfam | PF02801 | Beta-ketoacyl synthase, C-terminal domain | 252 | 368 | 2.0E-31 |
| 8 | g14167.t1 | Pfam | PF16197 | Ketoacyl-synthetase C-terminal extension | 373 | 482 | 6.0E-24 |
| 7 | g14167.t1 | Pfam | PF00698 | Acyl transferase domain | 509 | 808 | 2.4E-51 |
| 3 | g14167.t1 | Pfam | PF14765 | Polyketide synthase dehydratase | 877 | 1075 | 6.0E-8 |
| 5 | g14167.t1 | Pfam | PF00107 | Zinc-binding dehydrogenase | 1579 | 1685 | 5.0E-11 |
| 2 | g14167.t1 | Pfam | PF08659 | KR domain | 1780 | 1958 | 2.7E-40 |
| 6 | g14167.t1 | Pfam | PF00550 | Phosphopantetheine attachment site | 2021 | 2079 | 8.1E-9 |
| 28 | g14167.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 1539 | - |
| 30 | g14167.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1540 | 1559 | - |
| 26 | g14167.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1560 | 1570 | - |
| 29 | g14167.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1571 | 1593 | - |
| 27 | g14167.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1594 | 2104 | - |
| 41 | g14167.t1 | ProSitePatterns | PS00606 | Beta-ketoacyl synthases active site. | 161 | 177 | - |
| 42 | g14167.t1 | ProSitePatterns | PS00012 | Phosphopantetheine attachment site. | 2043 | 2058 | - |
| 43 | g14167.t1 | ProSiteProfiles | PS50075 | Carrier protein (CP) domain profile. | 2010 | 2093 | 12.53 |
| 39 | g14167.t1 | SMART | SM00825 | Beta-ketoacyl synthase | 12 | 418 | 8.8E-89 |
| 37 | g14167.t1 | SMART | SM00827 | Acyl transferase domain in polyketide synthase (PKS) enzymes. | 511 | 801 | 2.4E-20 |
| 36 | g14167.t1 | SMART | SM00829 | PKS_ER_names_mod | 1424 | 1753 | 8.5E-79 |
| 40 | g14167.t1 | SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | 1779 | 1960 | 1.2E-23 |
| 38 | g14167.t1 | SMART | SM00823 | Phosphopantetheine attachment site | 2016 | 2074 | 0.0043 |
| 12 | g14167.t1 | SUPERFAMILY | SSF53901 | Thiolase-like | 8 | 414 | 1.92E-59 |
| 11 | g14167.t1 | SUPERFAMILY | SSF52151 | FabD/lysophospholipase-like | 508 | 791 | 9.42E-37 |
| 17 | g14167.t1 | SUPERFAMILY | SSF55048 | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 633 | 688 | 1.31E-6 |
| 15 | g14167.t1 | SUPERFAMILY | SSF50129 | GroES-like | 1446 | 1574 | 2.22E-9 |
| 14 | g14167.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1539 | 1685 | 6.64E-31 |
| 13 | g14167.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1780 | 1967 | 1.27E-25 |
| 16 | g14167.t1 | SUPERFAMILY | SSF47336 | ACP-like | 2019 | 2082 | 9.42E-10 |
| 35 | g14167.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1540 | 1562 | - |
| 34 | g14167.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1571 | 1593 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0031177 | phosphopantetheine binding | MF |
| GO:0016746 | acyltransferase activity | MF |
| GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | MF |
| GO:0016740 | transferase activity | MF |
| GO:0006633 | fatty acid biosynthetic process | BP |
| GO:0055114 | NA | NA |
| GO:0016491 | oxidoreductase activity | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed