General information for g14551.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Fatty acid synthase.
Parent gene
- The parent gene g14551 is located on chr_4: 1322491..1328241 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_4 | g14551 | g14551.t1 | TTS | g14551.t1 | 1321144 | 1321144 |
| chr_4 | g14551 | g14551.t1 | isoform | g14551.t1 | 1321187 | 1328241 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon1 | 1321187 | 1322015 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS1 | 1321187 | 1322015 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon2 | 1322176 | 1322528 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS2 | 1322176 | 1322528 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon3 | 1322584 | 1323490 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS3 | 1322584 | 1323490 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon4 | 1323597 | 1325052 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS4 | 1323597 | 1325052 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon5 | 1325158 | 1325378 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS5 | 1325158 | 1325378 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon6 | 1325546 | 1327074 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS6 | 1325546 | 1327074 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon7 | 1327206 | 1327494 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS7 | 1327206 | 1327494 |
| chr_4 | g14551 | g14551.t1 | exon | g14551.t1.exon8 | 1327595 | 1328241 |
| chr_4 | g14551 | g14551.t1 | cds | g14551.t1.CDS8 | 1327595 | 1328241 |
| chr_4 | g14551 | g14551.t1 | TSS | g14551.t1 | NA | NA |
Sequences
>g14551.t1 Gene=g14551 Length=6231
ATGACACCAAAACCATTGGAAATTCCAACTAAGAATTTCAAAAATGACAACGAACCAACA
GTCGTCATATCAGGCATGTCCGGAAGATTTCCAAAGTCGCAAAATATCGCAGAATTTAAA
GAAAACTTGATGAATAAAGTTGACATGACCGAACCATGTGAAACACGTTTTAAACAACTT
AATGAGCTCATTCCTGACCGTTGTGGTCAAACTAAAAATATTGAAAAATTCGATTCAGCT
TTCTTCAACATTCCAGCTGAATTTGCAAATCATTTGGATCCAATGTGTCGAACATTACTT
GAACATGTTTATGAAGCAATTATTGATGCTGGTGTATCACCAAAAAGTATCAGAGGAACT
AAAACTGGTGTCTTTGTTGGCTGCTGTTTTGCTGATTGTCATGAATATTCGATTAGAGAA
AAGAGTGGCAAAGAAGTTACAGGATCATTGAGAACTTTAATTCCAAACCATGTGTCTTAT
GCATTTGATTTCAAAGGGCCCTCTTATGTAATTGATTCAGCTTGTAGTAGTAGTGGATAT
GCTGCTGATGTTGCATTGAAATCAATCAAAAGTGGTGAATGTGATGCAGCTATTTTAGCT
GGAACTAATTTAGTGCTCGGACCAGCATTGAGCATGGGATTTAATAAAATGGGAGTGTTA
TCAAAAGACGGTATAGGAAAATCATTCGATGAAGAAGCCAATGGCTATTGTCGTGCTGAT
GCAATTGTTGCTCTATTTTTACAAAAATCAACTGATGCTAAACGAGTTTATGCAACTTTT
GTCCATGCTAAGAAAAATGTTGATGGTTATAAAAAGGAAGGGTTGCCATTTCCATCAAAA
GTTATGCAAGTGAAACTTTTTGAAGAATTTTATCAAGAAATTGGGATGAATCCAAATGAT
GTTGATTATATTGAAGCTCATAGCACTGGAACTAAAGTTGGTGATTTAGAAGAAGTTCCA
GGCCTTGATTCAATCTTCTGTTCAAATCGGAAATCTCCTTTACTAATTGGTTCATTAAAG
TCTAACATGGGACATTCTGAAGCTGCATCAACAACAAGTTCGATTGTGAAATCGCTTCTA
ATTTTTGAAAATAAAAAACTTTTTTCGAATTTGCACTTTAATAAACCAAGATCAGGCATT
GAAGCATTTGAAAAAGGAAGCATTAAAGTGGTAGATGAAATGACAGATTTCAAAGGTTCT
CTAATTGGTATCAATTCTTTTGGTGTTGGTGGTGCAAATGTGCATTTGCTTTTGAAATCA
CATGAGAAAGAGAAAATCAACAATGGCGCAATCAATGATAAACTAGAAAGAATTTTACTT
TGGTCAGGTCGAACAAAGGAAGCTGTAGAAATGATATTTGATAGCGTAACTAAAGCACCA
TTGGATGCTGAACATATTGCATTATTACAGCATTCACAAGAGCAAACAATTGCACTGAAT
ACTTTTCGTGGTTTTGCAATTTTTGATCCACGAATTTCAGTCGATGAAAATTCAAAATGT
GTACATAAAGAAATCAACAATTATCTTGATGGTAAACGAAAAATCGCATTCGTGTATAGT
GGCATAGGCTCACAATGGCCACAAATGATTTCTGACTTGATGAGAATTCCAACATTTGCA
AAATCAATCAATAAATGTCATGAAATTTTATTATCAAAAAATCTCAATTTGAAGGAAATT
TTATCATCACCAAATGAAGCTGCAAATGTGCTTCATTCATACATTTCTATTGCTGCAATA
CAAATAGCATTGACAGACATTTTGACAACTATTGGTGTGAAAGCTGATTATATTTTGGGA
CATTCAGTAGGTGAATTGGGTTGTGCTTATGCTGATAATTGTTTAACTGATGAAGAAATG
ATTTTATGTGCATATTCACGTGGTATTGCGACACTTGAAACTAAAACAATTAATGGTGCA
ATGGCTGCTGTTGGTGTTGGTTATAATGAACTTAAAGGTCGACTTATTGAAGGTGTTGAA
ATTGCTTGTCATAATAATTCAACTTCATGCACAATTTCTGGGCCTCGTGTGAAAATTGAA
AAATTCATCCAGCAACTTAAGGCAGAAAATTGCTTTGTTCGTGAAGTTAATTCGGGTGGA
ATTGCTTTTCATAGCAGTTACATTGCACCAATGGGACCAAAATTACAAAAACTTCTTGAA
AGTGTCATAAAAAATCCAAAAGAAAGATCACAAAAATGGATCAGCACAAGTGTACCAAAG
GAAAAGTTCGAAAATGAAGAATCACGTTTGTCATCAGCTAAATATCATACAAACAATTTA
TTAAATCCAGTTTTATTTGAAGAAGCTCTCGCTAGTTTACCTGAAAAATGTTTGACAATT
GAAATTGCTCCATGTGGATTATTGCAAGCAATTTTAAAACGAGCTGTGCCTAATGGACTT
CATTTTAGTTTGACAAAGCGAGAACATAAGGAAAATGCAAGATTTTTGATGAATTCACTT
GGAAAAATTTTCACCAATGGTGTTGACATGAGCATTCAAAATCTTTACCCAAAAATCAAT
TTTCCTGTTTCACGTGGAACTTCAATGATTTCACCATTGATTAAATGGGACCACAGCAGT
AATTTCAAAGCTTTTAAAATGGATGAACTTGATGTCAATGAATTAAAAGTTCCAATTATG
ATGAGAGATCCAAATTTTGAATTTTTAGCTGGTCATAAAATTGAAGGAAAAATAATTTTC
CCTGGCACTGGTTATCTTTACATTGCTTGTCGTCTTGCTGCAGCTCATCATAAGCAAAAA
TTTGAAGATTTCGATATTGAAATGGATGACATTCGATTCCATAATGCTTGTTTCTTATCA
TATGAAAAAGATGTTGAACTTATGGCAGTTTATCATGGTGGTGATGGAAAATTTGAAATT
CGTGAAGGCAAAACTGTCATGTGTACTGGTTATATTCGTCCTAGTTCTAGTTCTAAGATA
AGAAATTATGAAGTTAAAGACAATAGTCACATTCCAGAAATGAATGGTGATGAATTTTAC
AAAGAACTTCGAATTCGAAATTACAATTATGAAAAATTATTTAGAAATGTTGTTGGTGCA
AAAATTGATGGCAGTCAAGTGAGAGCAAAATGGGAAAATAATTGGATTGCATTTTTTGAT
AATCTCGGGCAATTAGTATTAATTTCAAAAGACGCGCGTGGATCATTAGTTCCAATTCGT
ATAAGAAAAGTTGTTTTAAGTCCAAGAGCATTTTTAGAACAATTGAAAACATTTGAAAAT
TTATCAGATCATGAAAAAATTGCAACAGCTTTTTACGATAAAGATTTAGACATGGTTCAT
TGTCCTGGAATGGAATTTCGTGGATTTACTTTTACATCTATTCCTAAATTACTCTATCGT
GGTCATCATGTTATGAGCTGTTATAAATTTATTTCACATTTTCCAACACCTGTCATAACT
GCTGAAAATGCTGCAAAAATTTGTGTCCAATTGGCAATGGAAAATTCAATGATTTTGAAA
ATTTCTTCTATTGAAATCGATGAAAGTGAAGAGTTAGAAGAGAATTCAGGAATTTTCAAT
GAATTTATGGCTAAAGCTATTGAATCTGTGCCTATTGTGACTTCTGATTTGATTTTTTTA
AGTAACAGAAATATTGAAAACGCAAATTTTGTGACAATTGAAAAATTGGAAACTTTAAAG
ACTAAAAAATCTGCTGATTTTCTGATTCGAAAAGGTTTTGAAAATCTTGAGACAATTGAG
CAACATTTGGCTGAATCTGCCTTTGTCATTTGTCGCAATTCAATTTCAGCAAATTCACCT
AAAAATTTACCCAAGAATTTTTCACTCACTGCAATTTTAAATCTTGAAAATGAAAAAATC
TTTTTAATTCAATATCACAAAAATCTACAAGAAATTCCAACAAATGTCATCAAAATATCA
AGCAGAGATTTTCAATGGTTGGAGCAACTTAAAGAAAGCATAAAAGAAAAACCAACTATT
GTTTATGCACAAAACGAAAAAAATTCTGGAATTCTTGGACTTGTAAATTGTTTAAGAAGA
GAACCGAATTGTGGAAATTTACGATGTGTTTTTATTGATGATGATTCTGCTCCTGATTTT
GAAATTGAAAAAGAATTTTATAAGAAGCAGTTGGAAAAAGGACTTGCTGTTAATATTTAT
AGAAATGGTCAATGGGGTTCTTATCGTCACTTAACTCTTCAACAACCTTCAATGTCAAAG
ATTTCTCCAACAGAAGTCTCAGCATTTTTAAATATTCAAACTCGTGGAGATCTTTCATCA
CTTAAATGGATTCAACAGCCTTTAAAACTAAAAGTTGATGGAAAACATGAAGTTGTTCGT
ATTCATTATGCAGCATTAAATTTTCGTGATGTCATGATTGCAACTGGTCGTGTTGGTCCA
GAAATGTTTGGTGATAAAAGAAATGATCAATTGAAAATTCTTGGATTTGAATTTTCTGGT
ATAACAATAACAGGTCGAAGAGTTTATGGTATGGCACCATATGGATGTCTTTCAACACAT
TTTTCTGATGAAAGAGTCATTTTACTTGATGTACCAAAAGAATGGTCACTAGAACAAGCA
GCAACAATTATTGGAACTTATGGAACAATAGCAATATCACTTTTTATGAAATGTCAAATT
GAAAAAGATAAATCAATTTTAATTCATGCTGGCTCGGGTGGTGTTGGTTTATCAGCTTTA
TATGTTGCTTTTGCAAGTGGCATGGAGGTTTTTACAACTGTCAGTAATGAAGAAAAACGA
CAGTTTTTGTTGGACACTTTTCCAAAATTAAAACCTGAAAATATTGGAAATTCACGTGAT
ACAACCTTTGAAGATATGATTATGAAAAGAACAAATGGAAGAGGTGTTGATTATGTCCTA
AATTCTCTATCTGATGATAAACTTTTGGCTTCACTTAGATGTGTTGCTAAAGCTGGATAT
TTTATTGAAATTGGCAAATCTGACATTGTTAGAGACAATAAAATTAATTTGGCTTGCTTT
GCGAATGAATTGACATTTATTTCTGTCAATATGGTCAATTGTGCTTTTACCGAAGGTCGT
TCTTTTGAGGATTTAAAATCATTCGTCAAACAAGGAATCAAGAAAAAATTCATTGTTCCA
TTGAAAACGACAGTTTTCAAGCCAGAACAAACTGAAGAAGCTTTCAGATATTTAGCAAGT
GGTAAACATATTGGAAAAGTTCTTATTCAACTTAGAGAAGGTGAAAAGCTGACTAAAGAA
CTTCTTCCAATGGAAATAATTCCAGCAATGTGCTTCAATGAAAATCACAGTTATATAATT
GTTGGTGGTCTTGGTGGATTTGGTTTGGAACTTGCAGATTGGATGATTTTAAGAGGCGGA
AAGAAAATTGTGCTGAGCTCAAGTCGTGGAATTTCTAATAATTATCAAACCTATAGAATG
AGACTCTGGGAAACTTACAATGCACAAATAAAAATTTCAACAGCTGATGTCACCACTGCA
GCAGGTTGTCAACAGTTAATCAATGAAGCATCAAAACTTGGTCCAATTGGTGGGATTTTT
AATTTAGCAGTAAAATTGAACGATGCATTATTTGAAAATCAAACACAAACAACATTTGAG
CAAACACTTGCAACTAAAGCAATCGCAACAAAACATCTTGATAAAATTTCAAGAAATTTC
TGTCCAAGTCTTGAATTTTTTGTTGTTTTTTCGAGTGTCTCATGTGGATTAGGTAATGCA
GGACAAAGTAATTATGGCATGGCAAATTCAATTATGGAAAGAATAATTGAGCAACGACAT
CAAGATGGCTTGCCAGCCAAAGCAATTCAATGGGGAGCAATAGGTGATGTTGGAATTTTA
GCAGATTTAAATGAAGAAAAAGAAATTAGTGGAACACTTATGCAAAGAATTTCATCATGT
CTTGAATCTATGGACACTTTAGTTCAATCATCAGATCCAATTGTTTGTAGCATGGTAGTA
GCTGAGAAGGGAAAAGCTATCTCAAGTAAAGCAGCAATGATTGAAAATATTTTGAAACTT
CTTGGTATTAAAGACATTAGTGCATATCCAGCTGATACGAAAGTTAGTGATTTTGGTATG
GACTCATTGCTTTCAGTCGAATTTATGCAACTTTTTGAGCGTGAATTTAACGTGCAATTG
TCAGTTGATGAAATGAGATCAATGACATTAGAAAAATTAATGAGTTATAGCAATGGAAAA
ATTGATGGAAAGAAAATGAAAATTGTTGATGGAAAAGTTGTTGAAATTTAA
>g14551.t1 Gene=g14551 Length=2076
MTPKPLEIPTKNFKNDNEPTVVISGMSGRFPKSQNIAEFKENLMNKVDMTEPCETRFKQL
NELIPDRCGQTKNIEKFDSAFFNIPAEFANHLDPMCRTLLEHVYEAIIDAGVSPKSIRGT
KTGVFVGCCFADCHEYSIREKSGKEVTGSLRTLIPNHVSYAFDFKGPSYVIDSACSSSGY
AADVALKSIKSGECDAAILAGTNLVLGPALSMGFNKMGVLSKDGIGKSFDEEANGYCRAD
AIVALFLQKSTDAKRVYATFVHAKKNVDGYKKEGLPFPSKVMQVKLFEEFYQEIGMNPND
VDYIEAHSTGTKVGDLEEVPGLDSIFCSNRKSPLLIGSLKSNMGHSEAASTTSSIVKSLL
IFENKKLFSNLHFNKPRSGIEAFEKGSIKVVDEMTDFKGSLIGINSFGVGGANVHLLLKS
HEKEKINNGAINDKLERILLWSGRTKEAVEMIFDSVTKAPLDAEHIALLQHSQEQTIALN
TFRGFAIFDPRISVDENSKCVHKEINNYLDGKRKIAFVYSGIGSQWPQMISDLMRIPTFA
KSINKCHEILLSKNLNLKEILSSPNEAANVLHSYISIAAIQIALTDILTTIGVKADYILG
HSVGELGCAYADNCLTDEEMILCAYSRGIATLETKTINGAMAAVGVGYNELKGRLIEGVE
IACHNNSTSCTISGPRVKIEKFIQQLKAENCFVREVNSGGIAFHSSYIAPMGPKLQKLLE
SVIKNPKERSQKWISTSVPKEKFENEESRLSSAKYHTNNLLNPVLFEEALASLPEKCLTI
EIAPCGLLQAILKRAVPNGLHFSLTKREHKENARFLMNSLGKIFTNGVDMSIQNLYPKIN
FPVSRGTSMISPLIKWDHSSNFKAFKMDELDVNELKVPIMMRDPNFEFLAGHKIEGKIIF
PGTGYLYIACRLAAAHHKQKFEDFDIEMDDIRFHNACFLSYEKDVELMAVYHGGDGKFEI
REGKTVMCTGYIRPSSSSKIRNYEVKDNSHIPEMNGDEFYKELRIRNYNYEKLFRNVVGA
KIDGSQVRAKWENNWIAFFDNLGQLVLISKDARGSLVPIRIRKVVLSPRAFLEQLKTFEN
LSDHEKIATAFYDKDLDMVHCPGMEFRGFTFTSIPKLLYRGHHVMSCYKFISHFPTPVIT
AENAAKICVQLAMENSMILKISSIEIDESEELEENSGIFNEFMAKAIESVPIVTSDLIFL
SNRNIENANFVTIEKLETLKTKKSADFLIRKGFENLETIEQHLAESAFVICRNSISANSP
KNLPKNFSLTAILNLENEKIFLIQYHKNLQEIPTNVIKISSRDFQWLEQLKESIKEKPTI
VYAQNEKNSGILGLVNCLRREPNCGNLRCVFIDDDSAPDFEIEKEFYKKQLEKGLAVNIY
RNGQWGSYRHLTLQQPSMSKISPTEVSAFLNIQTRGDLSSLKWIQQPLKLKVDGKHEVVR
IHYAALNFRDVMIATGRVGPEMFGDKRNDQLKILGFEFSGITITGRRVYGMAPYGCLSTH
FSDERVILLDVPKEWSLEQAATIIGTYGTIAISLFMKCQIEKDKSILIHAGSGGVGLSAL
YVAFASGMEVFTTVSNEEKRQFLLDTFPKLKPENIGNSRDTTFEDMIMKRTNGRGVDYVL
NSLSDDKLLASLRCVAKAGYFIEIGKSDIVRDNKINLACFANELTFISVNMVNCAFTEGR
SFEDLKSFVKQGIKKKFIVPLKTTVFKPEQTEEAFRYLASGKHIGKVLIQLREGEKLTKE
LLPMEIIPAMCFNENHSYIIVGGLGGFGLELADWMILRGGKKIVLSSSRGISNNYQTYRM
RLWETYNAQIKISTADVTTAAGCQQLINEASKLGPIGGIFNLAVKLNDALFENQTQTTFE
QTLATKAIATKHLDKISRNFCPSLEFFVVFSSVSCGLGNAGQSNYGMANSIMERIIEQRH
QDGLPAKAIQWGAIGDVGILADLNEEKEISGTLMQRISSCLESMDTLVQSSDPIVCSMVV
AEKGKAISSKAAMIENILKLLGIKDISAYPADTKVSDFGMDSLLSVEFMQLFEREFNVQL
SVDEMRSMTLEKLMSYSNGKIDGKKMKIVDGKVVEI
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 30 | g14551.t1 | CDD | cd00833 | PKS | 21 | 418 | 0.0e+00 |
| 31 | g14551.t1 | CDD | cd05195 | enoyl_red | 1436 | 1729 | 0.0e+00 |
| 29 | g14551.t1 | CDD | cd08954 | KR_1_FAS_SDR_x | 1753 | 1981 | 0.0e+00 |
| 25 | g14551.t1 | Gene3D | G3DSA:3.40.47.10 | - | 19 | 420 | 0.0e+00 |
| 23 | g14551.t1 | Gene3D | G3DSA:3.30.70.3290 | - | 435 | 863 | 0.0e+00 |
| 28 | g14551.t1 | Gene3D | G3DSA:3.40.366.10 | - | 511 | 827 | 0.0e+00 |
| 24 | g14551.t1 | Gene3D | G3DSA:3.10.129.110 | - | 874 | 1117 | 0.0e+00 |
| 22 | g14551.t1 | Gene3D | G3DSA:3.40.50.720 | - | 1302 | 1980 | 0.0e+00 |
| 27 | g14551.t1 | Gene3D | G3DSA:3.90.180.10 | - | 1395 | 1750 | 0.0e+00 |
| 26 | g14551.t1 | Gene3D | G3DSA:1.10.1200.10 | - | 1985 | 2068 | 0.0e+00 |
| 9 | g14551.t1 | PANTHER | PTHR43775 | FATTY ACID SYNTHASE | 16 | 2060 | 0.0e+00 |
| 10 | g14551.t1 | PANTHER | PTHR43775:SF23 | FATTY ACID SYNTHASE 3 | 16 | 2060 | 0.0e+00 |
| 4 | g14551.t1 | Pfam | PF00109 | Beta-ketoacyl synthase, N-terminal domain | 20 | 253 | 0.0e+00 |
| 1 | g14551.t1 | Pfam | PF02801 | Beta-ketoacyl synthase, C-terminal domain | 257 | 373 | 0.0e+00 |
| 8 | g14551.t1 | Pfam | PF16197 | Ketoacyl-synthetase C-terminal extension | 376 | 487 | 0.0e+00 |
| 6 | g14551.t1 | Pfam | PF00698 | Acyl transferase domain | 517 | 828 | 0.0e+00 |
| 3 | g14551.t1 | Pfam | PF14765 | Polyketide synthase dehydratase | 885 | 1068 | 0.0e+00 |
| 7 | g14551.t1 | Pfam | PF13602 | Zinc-binding dehydrogenase | 1597 | 1729 | 0.0e+00 |
| 2 | g14551.t1 | Pfam | PF08659 | KR domain | 1757 | 1935 | 0.0e+00 |
| 5 | g14551.t1 | Pfam | PF00550 | Phosphopantetheine attachment site | 1997 | 2053 | 1.1e-06 |
| 20 | g14551.t1 | SMART | SM00825 | Beta-ketoacyl synthase | 21 | 423 | 0.0e+00 |
| 19 | g14551.t1 | SMART | SM00827 | Acyl transferase domain in polyketide synthase (PKS) enzymes. | 518 | 809 | 0.0e+00 |
| 18 | g14551.t1 | SMART | SM00829 | PKS_ER_names_mod | 1416 | 1729 | 0.0e+00 |
| 21 | g14551.t1 | SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | 1756 | 1937 | 0.0e+00 |
| 12 | g14551.t1 | SUPERFAMILY | SSF53901 | Thiolase-like | 15 | 419 | 0.0e+00 |
| 11 | g14551.t1 | SUPERFAMILY | SSF52151 | FabD/lysophospholipase-like | 514 | 799 | 0.0e+00 |
| 17 | g14551.t1 | SUPERFAMILY | SSF55048 | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 638 | 694 | 6.0e-07 |
| 15 | g14551.t1 | SUPERFAMILY | SSF50129 | GroES-like | 1422 | 1549 | 0.0e+00 |
| 13 | g14551.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1518 | 1677 | 0.0e+00 |
| 14 | g14551.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1754 | 1956 | 0.0e+00 |
| 16 | g14551.t1 | SUPERFAMILY | SSF47336 | ACP-like | 1993 | 2056 | 0.0e+00 |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0016746 | acyltransferase activity | MF |
| GO:0016740 | transferase activity | MF |
| GO:0016491 | oxidoreductase activity | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
