General information for g1564.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Fatty acid synthase.
Parent gene
- The parent gene g1564 is located on chr_3: 11905112..11906549 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_3 | g1564 | g1564.t1 | isoform | g1564.t1 | 11896857 | 11905112 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon1 | 11896857 | 11897670 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS1 | 11896857 | 11897670 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon2 | 11897725 | 11898074 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS2 | 11897725 | 11898074 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon3 | 11899782 | 11904141 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS3 | 11899782 | 11904141 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon4 | 11904195 | 11904267 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS4 | 11904195 | 11904267 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon5 | 11904331 | 11904461 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS5 | 11904331 | 11904461 |
| chr_3 | g1564 | g1564.t1 | exon | g1564.t1.exon6 | 11904688 | 11905112 |
| chr_3 | g1564 | g1564.t1 | cds | g1564.t1.CDS6 | 11904688 | 11905112 |
| chr_3 | g1564 | g1564.t1 | TSS | g1564.t1 | NA | NA |
| chr_3 | g1564 | g1564.t1 | TTS | g1564.t1 | NA | NA |
Sequences
>g1564.t1 Gene=g1564 Length=6153
ATGAGTTTTCTAAAAAGTAAAAGTGATGATGTGATTATAACTGGAATTGCTGGAAGATTT
CCAAAATCTCGAAATGTTCAGGAATTTGCATCGAATTTGTTTAATAAAATTGACATGACT
GATGACAGTGATGAACGTTTTAAAAATATTTCTGACGATGTTCCTCATCGTTCTGGTAAA
ATTTCTGACCTTGAAAAATTCGATACTTCTTTTTTTTCAATATTGAATGATCAAGCAAAG
TATACTGATCCACAAATGAGGATTCTACTCGAACATTCGTATGAAGCAATTTTAGATGCT
GGAATTTCACCTCAAACGTTAATTGGTAGCAATACTGGAGTTTTTGTTGGTTGCAGTGCT
TCAGAAGCAAAAAATTTTTATGTTAAAGGCTTTTGTGATATTCCAGATCAAATGTTCCTC
ACTGGAAACGGAATGTTTTATTTGGCAAATCGGATTTCTTATACATTTGGTTTATGTGGA
CCTTCATTAGTTCTCGATTCAGCATGTTCAAGTGCATCCCAAGCATTAGACTGTGCTTAC
AATTATATGAAAACAGGTTTATGCGAGGCTGCTTTAGTAGCTGGTACAAATTTAATCTTT
ACTCCTTTTATGTTTGAAAAATTCAATGCAATGAAAATACTTACTAATGATGGAATTTCT
AAAATATTCGATGAAGATTCAAAAGGTTTCGTTCGTGCTGAAACAATCAGTGTGATTTTC
TTACAAAATCGAAAAGTTGCAAAAAGAATTTATGCTCATTTGGTTCATTCTTTATCTAAT
AATGATGGTTTTAAGATCGAAGGTTCATCATTACCATCTAAAAAAATGCAACAAAAACTT
ATGACAAAATTTTATCAAGACATCAATTTTGATCCGCGTGAAATCAAATTCTTTGAAGCT
CACGCGACTGGAACTAAACAAGGTGATTTTCAAGAAGTTAATGCAATTGATGCTGTTTTA
TGCCAAAATCGATCAGATCAGTTGATTATCGGTAGTACAAAATCAAATATGGGTCACAGT
GAAGCCGCTAGTGGATTGGCATCGATAGCTAAAATTTTGATTGCTTTTGAAAATGGAAAA
TTTCCACCAAACATAAATTTGACAAAACTTCGTGATGATATTCCTGCATTCAAAGAAAAT
CGAATTGTTGTTGCTACTGATTCTATTGATTTAACTTCACCTTATATTGCTATGAATTCA
TTTGCACTAGGAAGTTCAAATGTTCATTTACTATTCAAACAAAACACTAAAGAAAAAACA
AATCAAAATCAAGAAAATGAAATTGAAAGAATGGTTTTATGGTCAGGAAGAACTGAAGAA
GCAATTCATTCAATTTTCGATGATATCACAAGTCGACCATTTGATATTGAATACATTGCA
TTGCTACAAAATTCTCAAATTCTTACACCAGATGCAAATTCTTATCGAGGTTTTGGAATA
TTTAAGAATGATCAAGAAAATTCAATTTCCATTGATCGCAATATACAATATTTTGATGGG
ATCAGAAAAAAAGTAGTTTTTGTATTTGCTGGAATGGGAACTCAATGGCATGGAATGGGA
CGTGATTTAATGAAAGTTCCATTATTTGCTGAATCCATTGAAGAAAGTCATGAAATACTG
TTTCAAAAAGGAATTAATTTGAAGGAAATTTTGAATTCAAATGAAGAAAAAACGTTTGAA
AATGTTTTGAATTCTTATGTTGGAATTGTTTCTATTGAAATTGCACTCACTGATGTTTTA
TTTGGTTTAAATATTAAACCTGACTTTATTGTTGGTCATTCAGTTGGTGAAATTGCTTGT
TCATATGCTGATGGTTGTTTGACAAGAGAAGAAGCTTTGACTATTGCTTATTTGAGAGCT
AAAATAATGCTTGATTTGAATATAAATGGAGGAGCAATGGTAGCTGTTGGAATGCATTTT
AATGAGCTTGAGAAAATTTTATCGAAAGAAATTGACATCGCTTGCCACAACAGTCAACAA
TCGACAACAATCAGTGGATCGAAAGCATCAATTGAGAAATTCACAGAACAACTAAAAGTG
CAGAAAATTTTTGTAAAAGAAGTTGCTTGTGCTGGAGTTCCGTTTCATAGTCGATATATG
AAAGATGTTGGACAAGAATTAGAAACAAAATTAAAATATCTGTTGAAATCTTCTAAAATT
CGTTCATCAAAATGGATAACATCAACTTATATAGAAGACAATGAGCAAAACCAACTTTGT
GATGCAAAATATCATGCTGATAATGTCAGAAATCCAGTTTATTTTGAAGAAGCTACATCA
AAATTACCTAAAAATGCAATCACAATTGAAATTTCACCAAATGGACTTTTTCAATCACTT
TTAAAATCAACATTAAATGAAAACATTTATGTAAGTCTTACAAATAAGAAAGCAGTTGAT
GGTAAAAATTATTTTATGAAATCACTTGGAAAAATCTTTCAATCGGGAGTTGATTTCAAT
ATAAGCAAACTTTATCCAACAATTGATTTTCCTGTATCACGTTGCACTCCAATGATTTCA
CCAATCATCAAATGGAATCATCAAGAAAGCCATTTTGTTGTTCAACATAAAAACTTGATG
GAATATCAGCGCAGAGTCAAAAATCTCAATTTTAAAGACAAAGAGCTTGAATATTTGTCT
CATCATATAATTGATGGAAGAGTTCTTGTACCTGCCACCTTTTGGATTGTTTATATTTGG
AAACAATTTGCTAAGATGCATGACATAAATTATGAAAGTTTAAGAGTTACACTTAAAAAT
GTAAAAATTTCTCGTGCCACTTATGTTAATTTGAAGCAAGAAATCGAAATAATTTCTACA
ATACATTGTTCAAATGGAAGTTTTGAAATAATGGAAGGGAAAAATTTGATTGCTAGTGGC
ATTATCGAACGCAATGAAAATCTCAAAATTTTTGAAATCGAAAATCAAACATATGAGAAA
GATTCAATTGTTTTAACTTTTGATGACTTTTATAAACATTTACGAGTTCTTGGGTATCAA
TATTTAGAAAAATTTAAATTAGTTCAGGAAATCACAGATGATGGATTGAAAGGAAAAATT
AAATGGAAAAATAATTGGGTTTTATTTTTAGACAATATAATTCAAACTACAGTATTAGCT
GAAAAATACGAAAGAGTTCATTTGCCATATTTTTTGAGTAAATTTTCAATTGATCCAATC
TTGCATAAAAAACTAATTGAAAAGTATAAAGGTTTTTTAATACCTTTTGAAAGAGCACAA
AATAAACAATACGTACGATGTGGTGGAGCTGAAAATGGAGATTTTACACCAATTATAATA
AATCAAAAACAACAAGGAAATCTTTTAGTAGAATTTTGCAAATTTATTTCTTTCGAAAAC
AGCAAGGAGTGTTTTGAAATTGTTGATGCATTAAAGATTTTAATATCTAGTCTCATGGAT
TTGAAATTTAAAATTAAATATAATTTTATTGAGATCAATAATGATCAGGAATATTTCATG
TATGATTATATAAATAAATTGTTTCAAAAGTATCCAATAGCTGTAAATGTTAAGTTATGG
GCAACTGAAAAAACTAAATTGGATGACATTGAAGTGATAAATGATCAAGTACTTTCAATA
CTAACTACTATTGATGCAGTTTTTACAAGTAATTGTATTCAAAATGAAGCTCTAATTGAG
AAAATTAAAAATATTCATTCTAATAGTGTAATAATTTCTCAAGAAAACTCAAATAAAGAA
ATATCAAATGACAAATTTGAAATTCTTTCAAAATTAAAATTATCTAATGAAAAAGCTTTA
TTTATGTTGAGATTTAAGCAACAAAAGGAAGAATTAAAAAAATTCAAAACAATTGAAATA
ACATCAGAAACTTCCGATTGGCTTGAAAATCTAAAAGAAGAAATCAAAAACTTTTCAAAC
AATAATTTTGATTCAATTATTTTGTATTCTCAAAAATCTAAAGGAATTTCTGGTTTACTT
GGCTTTTTCAACTGTTTAAGATTAGAATTTAATGAAATTAATTTCAAATGTTTTATGATT
GAAGACCTAAATGCACTTAAATTTGATATTGATGATCCATTTTATAAAAATCAATTAGAA
AAAGGTTTTACAGTCAATGTACTGAAAAATAATGAATGGGGAAGTTATCGACATATTGAT
TTAGAAGAAGATACTTCACTTAAACCATATGATGGTCATTGCTTTGCAAATTATTCAATG
ACCGGAAATCTTTCAACTTTAAAATGGTTTGATGGACCTTTCAATGAAATTTCTGAAGAT
GATCTTATAAAAGTTCAATATGCAGCATTAAATTTCAAAGATATTGTTTATGCTTTTGGA
CGAATTCCTGACGAAAATTGTTTCATGAGAGAATGCTCGATAGGATTTGAATTCTCAGGA
ATTCGAATTAAAACTGGAGAACGTGTGATGGGAATAGTTTCAAGACAAGGATTATCATCA
TATATCAAATACAACCCGAAAAAAACACTTAATGTTCCTGAAGATTTAACATTAGAAGAT
GCAGCAACTATTCCAATGGCATATGTCACCACTTTCTTTTCGGTTTTTGAAATGACTAAA
ATTGAGAAAGGAAATTCAATTTTGATTCATTCTGGTGCTGGCGCTGTAGGTCAAGCTGCA
ATTCAAATAGCTTTTGCTTATGGTTTAGAAGTTTTTACAACTGTTGGCACTGATGAAAAA
CGAGAATTTTTACTTAAAACTTTTCCGAAATTAAAAGAAGAAAATATTGGAAATTCTCGT
GACACTTCATTTTTAGAAATGATTATGGAAAGAACTCAAAACAAAGGAGTCGATTACGTG
CTGAACTCACTTGCTGGTGATAAAATGATTGCTTCATTGAATTGTTTGGGTCAAAATGGA
ATTTTCTTAGAAATCGGAAGAGCTGATTTAGTTCAAAATACTAGGATTAGTTTCAATTTT
ATCAAGAAAAATATTTCGATTAAGTTAGTTATGGTTGACAAAATTGATTGGGCAAGTGAT
CAAGGCGAGAGAGTAAAACAAATGATGATAAATGGTTTTAAAGAAAGAATCATAAAACCA
TTGACTCGAACTGTTTTCGAAGCAAATGAAATTAAAAAAGCTTTTCAACACATGTCAACT
GGCAATCACATTGGAAAAATTTTGATAAAAATGCGTGAAAATGAATATGATTTATCAACT
ATTCCTATTAATATCACATCGAGATTTTATTGCAATTCTGAGTATTCTTATATCGTTGTT
GGTGGTCTTGGTGGACTTGGACTGGAATTTTCTCATTGGTTAATTGAAAGAAAATGTAGA
AAATTGATATTAAGCTCAAGCCGTGGAATTAGCAATCAATATCAAGCATTTAAAATTAAA
TATTGGAAATCATTTGGAATTGAAGTCATTGTGAACACATCAAATGTTCTAACTGAAGCA
GGTTGTGAAAAACTCATTAAAACAGCAATGACTTTAGGTCCAGTTGGCGGAATTTTTAAT
TTTGCTGCTGTCATACGTGATGCTGAATTTGAAAATCACACAATTGAAGATTTCAATCAA
TCTCTGGCACCAAAAGCTTTGGCTACAAAATTCTTGCATGAATTATCACTAAAATATTGT
CCAATGTTGAAACATTTTGTTGGTTATTCAAGTATCATGTGTGGTCGAGGATATCCAGGT
CAAACAACTTATGGAATGGCAAATTCGATCATGGAAAGAATCATTGAAGAGCGATATGAG
ATGGGACTGCCAGCAAAAGTTATTCAATGGGGTCCAATCGGTGATGTCGGCTTACTTGCT
GATGTTGAATTGAATCGGAAAATGAAATTGAATTTTGAATTTCCAATGCAATCACTTGCA
TCATTTTTAGAGCAACATGATATTCTTTTAAATCATCCTGAACCAATTGTTGCTTGCACA
GTGATTTTTAATAAGAATGATAAATCTACTGATGAGAAGAAAAATTTCATCGAAATGTTG
ATGGAAGTTTTAAATATTGAAGATCGAAAGTCAATTTCAATGAGTTCAACATTTTCACAA
CTTGGCATTGATTCGCTTGCTGGAATAGAAATACAACAAATGATTGAAAGAAATTATGGT
GTTCTAATAGAATCTAATGAATTGAGAAACTTAACTATTTTCGAATTGGATGAAAAAATT
TCTAAAAAAACAATAAATAATTCTTTGTTTTAA
>g1564.t1 Gene=g1564 Length=2050
MSFLKSKSDDVIITGIAGRFPKSRNVQEFASNLFNKIDMTDDSDERFKNISDDVPHRSGK
ISDLEKFDTSFFSILNDQAKYTDPQMRILLEHSYEAILDAGISPQTLIGSNTGVFVGCSA
SEAKNFYVKGFCDIPDQMFLTGNGMFYLANRISYTFGLCGPSLVLDSACSSASQALDCAY
NYMKTGLCEAALVAGTNLIFTPFMFEKFNAMKILTNDGISKIFDEDSKGFVRAETISVIF
LQNRKVAKRIYAHLVHSLSNNDGFKIEGSSLPSKKMQQKLMTKFYQDINFDPREIKFFEA
HATGTKQGDFQEVNAIDAVLCQNRSDQLIIGSTKSNMGHSEAASGLASIAKILIAFENGK
FPPNINLTKLRDDIPAFKENRIVVATDSIDLTSPYIAMNSFALGSSNVHLLFKQNTKEKT
NQNQENEIERMVLWSGRTEEAIHSIFDDITSRPFDIEYIALLQNSQILTPDANSYRGFGI
FKNDQENSISIDRNIQYFDGIRKKVVFVFAGMGTQWHGMGRDLMKVPLFAESIEESHEIL
FQKGINLKEILNSNEEKTFENVLNSYVGIVSIEIALTDVLFGLNIKPDFIVGHSVGEIAC
SYADGCLTREEALTIAYLRAKIMLDLNINGGAMVAVGMHFNELEKILSKEIDIACHNSQQ
STTISGSKASIEKFTEQLKVQKIFVKEVACAGVPFHSRYMKDVGQELETKLKYLLKSSKI
RSSKWITSTYIEDNEQNQLCDAKYHADNVRNPVYFEEATSKLPKNAITIEISPNGLFQSL
LKSTLNENIYVSLTNKKAVDGKNYFMKSLGKIFQSGVDFNISKLYPTIDFPVSRCTPMIS
PIIKWNHQESHFVVQHKNLMEYQRRVKNLNFKDKELEYLSHHIIDGRVLVPATFWIVYIW
KQFAKMHDINYESLRVTLKNVKISRATYVNLKQEIEIISTIHCSNGSFEIMEGKNLIASG
IIERNENLKIFEIENQTYEKDSIVLTFDDFYKHLRVLGYQYLEKFKLVQEITDDGLKGKI
KWKNNWVLFLDNIIQTTVLAEKYERVHLPYFLSKFSIDPILHKKLIEKYKGFLIPFERAQ
NKQYVRCGGAENGDFTPIIINQKQQGNLLVEFCKFISFENSKECFEIVDALKILISSLMD
LKFKIKYNFIEINNDQEYFMYDYINKLFQKYPIAVNVKLWATEKTKLDDIEVINDQVLSI
LTTIDAVFTSNCIQNEALIEKIKNIHSNSVIISQENSNKEISNDKFEILSKLKLSNEKAL
FMLRFKQQKEELKKFKTIEITSETSDWLENLKEEIKNFSNNNFDSIILYSQKSKGISGLL
GFFNCLRLEFNEINFKCFMIEDLNALKFDIDDPFYKNQLEKGFTVNVLKNNEWGSYRHID
LEEDTSLKPYDGHCFANYSMTGNLSTLKWFDGPFNEISEDDLIKVQYAALNFKDIVYAFG
RIPDENCFMRECSIGFEFSGIRIKTGERVMGIVSRQGLSSYIKYNPKKTLNVPEDLTLED
AATIPMAYVTTFFSVFEMTKIEKGNSILIHSGAGAVGQAAIQIAFAYGLEVFTTVGTDEK
REFLLKTFPKLKEENIGNSRDTSFLEMIMERTQNKGVDYVLNSLAGDKMIASLNCLGQNG
IFLEIGRADLVQNTRISFNFIKKNISIKLVMVDKIDWASDQGERVKQMMINGFKERIIKP
LTRTVFEANEIKKAFQHMSTGNHIGKILIKMRENEYDLSTIPINITSRFYCNSEYSYIVV
GGLGGLGLEFSHWLIERKCRKLILSSSRGISNQYQAFKIKYWKSFGIEVIVNTSNVLTEA
GCEKLIKTAMTLGPVGGIFNFAAVIRDAEFENHTIEDFNQSLAPKALATKFLHELSLKYC
PMLKHFVGYSSIMCGRGYPGQTTYGMANSIMERIIEERYEMGLPAKVIQWGPIGDVGLLA
DVELNRKMKLNFEFPMQSLASFLEQHDILLNHPEPIVACTVIFNKNDKSTDEKKNFIEML
MEVLNIEDRKSISMSSTFSQLGIDSLAGIEIQQMIERNYGVLIESNELRNLTIFELDEKI
SKKTINNSLF
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 27 | g1564.t1 | CDD | cd00833 | PKS | 9 | 411 | 1.36418E-122 |
| 28 | g1564.t1 | CDD | cd05195 | enoyl_red | 1423 | 1709 | 2.72175E-96 |
| 20 | g1564.t1 | Gene3D | G3DSA:3.40.47.10 | - | 8 | 414 | 4.5E-118 |
| 18 | g1564.t1 | Gene3D | G3DSA:3.30.70.3290 | - | 429 | 851 | 1.0E-149 |
| 23 | g1564.t1 | Gene3D | G3DSA:3.40.366.10 | - | 501 | 816 | 1.0E-149 |
| 19 | g1564.t1 | Gene3D | G3DSA:3.10.129.110 | - | 865 | 1105 | 5.9E-48 |
| 17 | g1564.t1 | Gene3D | G3DSA:3.40.50.720 | - | 1283 | 1961 | 1.6E-232 |
| 22 | g1564.t1 | Gene3D | G3DSA:3.90.180.10 | - | 1383 | 1729 | 1.6E-232 |
| 21 | g1564.t1 | Gene3D | G3DSA:1.10.1200.10 | - | 1967 | 2048 | 2.0E-13 |
| 8 | g1564.t1 | PANTHER | PTHR43775 | FATTY ACID SYNTHASE | 6 | 2044 | 0.0 |
| 9 | g1564.t1 | PANTHER | PTHR43775:SF23 | FATTY ACID SYNTHASE 3 | 6 | 2044 | 0.0 |
| 6 | g1564.t1 | Pfam | PF00109 | Beta-ketoacyl synthase, N-terminal domain | 9 | 245 | 8.3E-53 |
| 1 | g1564.t1 | Pfam | PF02801 | Beta-ketoacyl synthase, C-terminal domain | 251 | 367 | 2.9E-31 |
| 7 | g1564.t1 | Pfam | PF16197 | Ketoacyl-synthetase C-terminal extension | 372 | 480 | 1.0E-20 |
| 4 | g1564.t1 | Pfam | PF00698 | Acyl transferase domain | 506 | 788 | 2.5E-62 |
| 3 | g1564.t1 | Pfam | PF00107 | Zinc-binding dehydrogenase | 1535 | 1653 | 2.9E-13 |
| 5 | g1564.t1 | Pfam | PF08659 | KR domain | 1736 | 1914 | 2.7E-36 |
| 2 | g1564.t1 | Pfam | PF00550 | Phosphopantetheine attachment site | 1978 | 2030 | 1.4E-6 |
| 25 | g1564.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 1734 | - |
| 26 | g1564.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1735 | 1755 | - |
| 24 | g1564.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1756 | 2050 | - |
| 29 | g1564.t1 | ProSitePatterns | PS00606 | Beta-ketoacyl synthases active site. | 160 | 176 | - |
| 34 | g1564.t1 | ProSiteProfiles | PS50075 | Carrier protein (CP) domain profile. | 1967 | 2050 | 10.24 |
| 32 | g1564.t1 | SMART | SM00825 | Beta-ketoacyl synthase | 11 | 415 | 9.1E-83 |
| 31 | g1564.t1 | SMART | SM00827 | Acyl transferase domain in polyketide synthase (PKS) enzymes. | 508 | 798 | 3.0E-39 |
| 30 | g1564.t1 | SMART | SM00829 | PKS_ER_names_mod | 1402 | 1709 | 4.1E-103 |
| 33 | g1564.t1 | SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | 1735 | 1916 | 2.5E-11 |
| 11 | g1564.t1 | SUPERFAMILY | SSF53901 | Thiolase-like | 6 | 366 | 5.61E-60 |
| 10 | g1564.t1 | SUPERFAMILY | SSF52151 | FabD/lysophospholipase-like | 504 | 788 | 9.68E-43 |
| 16 | g1564.t1 | SUPERFAMILY | SSF55048 | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 629 | 685 | 3.4E-8 |
| 14 | g1564.t1 | SUPERFAMILY | SSF50129 | GroES-like | 1401 | 1522 | 2.69E-15 |
| 13 | g1564.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1495 | 1652 | 5.45E-36 |
| 12 | g1564.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1736 | 1922 | 6.26E-26 |
| 15 | g1564.t1 | SUPERFAMILY | SSF47336 | ACP-like | 1976 | 2040 | 3.01E-8 |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0016746 | acyltransferase activity | MF |
| GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | MF |
| GO:0016740 | transferase activity | MF |
| GO:0006633 | fatty acid biosynthetic process | BP |
| GO:0055114 | NA | NA |
| GO:0016491 | oxidoreductase activity | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed