Gene loci information

Transcript annotation

  • This transcript has been annotated as Fatty acid synthase.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_4 g16032 g16032.t1 isoform g16032.t1 7876710 7886296
chr_4 g16032 g16032.t1 exon g16032.t1.exon1 7876710 7877365
chr_4 g16032 g16032.t1 cds g16032.t1.CDS1 7876710 7877365
chr_4 g16032 g16032.t1 exon g16032.t1.exon2 7879127 7879415
chr_4 g16032 g16032.t1 cds g16032.t1.CDS2 7879127 7879415
chr_4 g16032 g16032.t1 exon g16032.t1.exon3 7879479 7879498
chr_4 g16032 g16032.t1 cds g16032.t1.CDS3 7879479 7879498
chr_4 g16032 g16032.t1 exon g16032.t1.exon4 7879562 7879827
chr_4 g16032 g16032.t1 cds g16032.t1.CDS4 7879562 7879827
chr_4 g16032 g16032.t1 exon g16032.t1.exon5 7879901 7880246
chr_4 g16032 g16032.t1 cds g16032.t1.CDS5 7879901 7880246
chr_4 g16032 g16032.t1 exon g16032.t1.exon6 7880306 7881199
chr_4 g16032 g16032.t1 cds g16032.t1.CDS6 7880306 7881199
chr_4 g16032 g16032.t1 exon g16032.t1.exon7 7881259 7883815
chr_4 g16032 g16032.t1 cds g16032.t1.CDS7 7881259 7883815
chr_4 g16032 g16032.t1 exon g16032.t1.exon8 7883877 7884226
chr_4 g16032 g16032.t1 cds g16032.t1.CDS8 7883877 7884226
chr_4 g16032 g16032.t1 exon g16032.t1.exon9 7884297 7885234
chr_4 g16032 g16032.t1 cds g16032.t1.CDS9 7884297 7885234
chr_4 g16032 g16032.t1 exon g16032.t1.exon10 7885300 7885421
chr_4 g16032 g16032.t1 cds g16032.t1.CDS10 7885300 7885421
chr_4 g16032 g16032.t1 exon g16032.t1.exon11 7885685 7886296
chr_4 g16032 g16032.t1 cds g16032.t1.CDS11 7885685 7886296
chr_4 g16032 g16032.t1 TSS g16032.t1 NA NA
chr_4 g16032 g16032.t1 TTS g16032.t1 NA NA

Sequences

>g16032.t1 Gene=g16032 Length=7050
ATGACTTTAAGTGAAAATCGTCGCATTCTAACTCGTGTTAAAGTTGATAGGGATGATGAG
ATTATCATATCAGGCATTTCTGGACGTTTTCCTAATTCTAAGAATGTTGAAGAATTAAGT
TACAATCTTTACAACAAGATTGATATGGTTGATGATGTTGAAAGACGTTGGAAACATCTA
AATGACGAAATGCCCAAGCGTTATGGAAAAACTGTAAATTTAGAGAAATTTGATGCTTCA
TTTTTCTCTATTAATTACAAACAAGCGCACAACATGGATCCACAAGCAAGAATTCTTCAA
GAACATGCATATGAGGCAATTATTGATGCAGGTGTTGCTCCAAAATCTCTAAGGGGTAGT
AGAACTGGTGTCTTTATCAGTTGCTGTATGACTGAAGCAGATGAGCATTTTTATTTTGGT
ACTGCGATTAAGGATGGCATGGGTCTAACAGGTTCAAGTCGTGCTTTATTGGCAAACAGA
ATTTCTTTTTCTATGGATTTGAAAGGACCGTCGTTCACAATAGATTCGGCATGCAGCAGC
TCCGGTTATGCTCTCGATTTGGCTTTTAATGCTATAAGAACTGGTGAATGTGATGCTGCT
ATTGTTGGTGGCTCAAATTTGCTTCTTCATCCAGCAACTACTTTACAATTTTATAGACTT
GGAGTCCTAAGCAAAGATGGCTATTGTCGACCATTTGACAAGGATGCTACAGGTTACTGT
CGTAGTGAAGCAGTAACGGTAATTTTCCTTCAAAAAAGAAAAGATGCTAAACGAATTTAT
GGTGAATTGGTCTATTCAAAAACAAATATTGATGGCTTTAAGAATGAAGGTCTTACTTAT
CCAAGCGGTAAAATTCAAATCAAATTATTAGCCGAATTTTATAAAGACCTTGGTATTGAC
CCAAAAACAATTGATTACATTGAAGCGCATTGCACTGGCACAAAAGTTGGCGATCCCGAA
GAATGTCTTGCTCTCGACACTATTTTTTGTAATGATAGAACAAAACCATTGCCTGTTGGT
TCTGTCAAATCAAATATGGGACACACTGAAGCTTCATCAACACTTTGTTCTATCATAAAA
TCTCTGTTGATTTTTGAAACCAAAAAGATTCCACCAAATATACATTTTACCGCACCAAGA
GATGATATTCCTTCTTTAGTAGATGGAAGATTGAAAGTTGTTAACGAAATAGAAAAATTT
GATGGCAATCTTATTAGTGTCAATTCATTTGGTTTTGGTGGCGCAAATGTTCACTGTTTG
TTAAAAAGAAATCCAAAACAAAAAGAAAATCGAGGTATTCCAAAAGATGACATTCCTCGA
TTAGTTTTATGGAGTGGACGAACAGAAAAAGCTGTAAATTCTGTTTTAGAAAATATTTCA
TCACAACCTCTTGATGCTGAATTTATTGCTTTGCTTCAAAATTCACAAATTTCTAATCCA
TCACTAAACACTTATCGCGGTTATGGAATTTATGCTAAAGTTAATGAAAATACAAAATGC
CTTGCACATCATGTTAATAATTTTGCATCATCAAAGAGACCTATTGTTTTCGTTTACAGT
GGTATGGGTTCACAATGGTCTCAAATGGGAACAGATTTAATGAAAATTCCAATTTTTGCA
TCAACAATTGAAAAGTGTCACAACATTTTGATCGAAAACCAAATAAATCTAAAAGAAATC
ATAACATCAAGTGATACATTAATTTTTGAAAATATTTTAAATTCTTTTGTTGGCATCGCA
GCAATTCAAATTGGTTTAACAAATATTATGAATGCAATTGGATTGAAACCAGATTTTGTG
ATTGGTCATTCAGTTGGTGAATTAGGATGTGCATATGCTGATAATTGTTTGACTGATGAA
GAAATGATTTTATGTGCATATTCACGTGGCATGGCAAGTCTTGAAAGTAAAATTATACAT
GGTGCTATGGCAGCAGTTAGTGTTGGTTATGATGAACTTAAAAATATGCTGATTGATGGT
GTAGAAATTGCTTGTCACAATAGCTCTGACTCATGCACTATTTCTGGACCATCAGAATTA
ATTGACGTATTTGTAAAGAAATTGAAAGAGAAAAATATTTTTGCAAAAAAAGTTCAATCA
TCAAACATTGCATATCATAGCTCTTATATTGCTCCTGCTGGTTCAAATTTACTACAACGG
TTAAAAACTATCATCAAAAATCCAAAAAAAAGATCATCAAAATGGATTTGTTCAAGTGTT
CCGAAAGAAAATTGGAATGATTTTGATTGTCGTTTTTCATCAGCACAATATCATTCTAAT
AATCTTCTCAATGCTGTGCTATTTCATGAAGCATCAGAAAATCTTCCAAAAGATGCTCTT
ACCATAGAAATCGCACCACATGGACTTTTACAATCTATAATTAAAAGATTATTGCCTGAT
GGTTTACATTTTAGTTTAACAAAGCGTGGAATTAGTGACAATTCACTTTATTTAATTGAA
TCTCTTGGAAAAATTTTTGAAAATGGCGTTGATATGGATATTTCAGCAATTTATCCACAA
ATAGAATTTCCAGTGTCATCTGGTACACCAATGATTTCACCATTAATCAAATGGGATCAT
ACAGAAAACTGGTTTGTTCCAAAATATGATGATAAAAAGCACAATGACATGCAAATTAAT
ATAAGCTTACAAGATTCAGAATTTGGATTCATTTCGGGACATGAAATTGATGGACGAGTT
TTATTTCCTGCAACTGGATATCTTTTTCTCACATGGAAACTTGCAGCATTACAAAATAAG
GAATTTTTTGATAAATTTGATGTTGAATTTGAAGATGTTAAATTTTTGCGAGCATGCAAT
ATTCCAGCTGATCCAAATGGAATTGAATTAACAGTTGTTGTTCAACGTGGAAGTGGAAAA
TTTGAAATAATTGATGGAAAAAATACTGTTTGTACAGGAATTGTACGAAATGCATCAGAA
TCAAAAATGAGACAGTTTTATCATGAAGATTCGAAAAAGATTGAAGTGAAAGCAAAAGAT
TTCTACAAAGAGCTTCGATTACGTGGTTATAATTATAAAGGTTTATTTAAATCAGTGATT
TCTTCACAATCAGATGGATCGAGTGGAGATATTAAATGGCAATCAAATTGGATTGCTTTT
CTTGATTGTCTTTTGCAATTAAAAATTTTTCCAAGAGACACACGTTCACTTGTATTGCCT
GTGGGTATAAAAAAGCTTACAATTAAAACAAGAGATCATTTAGCATTGGCATCAGATCTT
GATAAAAATGAAACATTCAAAGCTTTTTATTGTTCCAAAATGAAAATCCTTCAATGTGGT
GGTGTTGAAATAAGAGGAGTGCAAACTCAAACTGTCAACCGTCGTCCACCAAATGGAATT
CCAATACTTGAAAGTTATCAATTCATTCCACATTACAAGAATTTAGTTTTATCAAAAATT
GACATTGCAAGATTTTGCATTCAACTTGCAATTGAAAATTTTGCAACTGCAAAAATTTCT
GCGGTAGAAATTGATATGAATGATGACAAAGAACCATTATGTGGATATTTTTATGCTGGA
ATAAATGAACAGCCACTTATAACAGCTGAATTGAATTATTTGACTTCAAGAGATGATGTG
AAAATTCCATATGTAAACGTAACAAATGAGAAATTTTCATCATTTAATAACAGCATTTTT
GTTATAAGATCAAATTGTCTCTCTGATAATGATTTTATGGAATCTATTGCATTGCAAACT
AATGAAAAATGCTTCATCTTAACAAGAGAATCGCTCGAAAGTAGCATGAATATTATATTT
CCACAAAATGTTCAAATCATTGCAAAATTTTCATCAGATAATGAAATTTTTGTTCTACTT
CAATATTTAAAAATTAAAGTAAATTTGCCATCAAATATTATTAAAATTACTAATGATGAT
TTTTCATGGTTGGATAAATTGAAAAGTATTGCAAAATCAGAACCTACAATTGTTTATGCT
GAAAATGAAGAAATCTCAGGAATTATTGGTCTTGTAAATTGTATAAGAAAGGAACCTGGT
TGCCAAATGGTTCGTTGTTTCTTTATTGATGATTGCAATGCACCACCATTTAATATTGAT
GATGAATTTTATAAAACTCAAATTAATAAAAATCTTGCAATGAATGTATTCCGTGATCGA
CAATGGGGAAGTTATAAGCATTTGCTACTTGATCCAATTTATGAAAAAATTCCTCAAAAT
GGAGCTTGCTATGCCAATGTTTTAACCCGTGGTGATTTATCATCTTTCAAATGGTTTCAA
AGTCATTTAACTGATTTATCACATAAAAATGTCGTCAAAGTTCATTGTTCATCATTAAAT
TTTCGTGATGTGATGTTAGCAACTGGAAAATTATCAGCAGATATTTTTGGTAACAATCGA
CTTGATCAAATGTATCTTTTTGGTTTAGAATTTTCTGGTATTACCAATAATGGTCGAAGA
GTTATGGGATTAAGAAATTGTAATGCACATGCAACACATATTTTAGCAGATAAAGAGCTG
TTATGGGATGTTCCTGATAATTGGACATTAGAAGAAGCTGCAACAGTTCCATGTGTTTAT
GCAACTGTTTATGCGTCATTTTTTATTGCAACAAAAATCAAAAGTGGCAAATCTATTTTA
ATTCATTCAGGAACTGGCGGTGTTGGCTTAGCTGCAATTCAAGTGGCACTTGCATATGGA
CTTGAAGTTTTTACAACTGTCAGTACAGAAGAAAAAAAGAAATTTTTACTTGAAAAATTT
CCACAATTGAACTATTTGAATATTGGTAATTCTCGAGATACATCATTTGAAGATTTAATA
ATGGAAAGAACATGCGGCAAAGGAGTTGATTATGTATTGAATTCATTGGCTGAAGAGAAA
TTGCTAGCATCATTGAGATGTTTGTCAAAAGGTGGAACATTTTTTGAAATTGGCAAATTT
GATATATCGAATGATAATAAGCTCGGCCTAGGAGAATTTATTAAAGAAATTTCATTCCAT
ACAATTTTTATCGATAATTATTTTGAAGCTTCATCAGATAAAAAAAAGGAAATAAGAGAA
TTACTCGATGCTGATATTAAAAAAGGCATTATAAAACCACTTAAAATGAATGTTTTTAAT
GCTGATGAAATTGTTCAAGCATTCAAATTACTTGCAAGTGGCAAACATATTGGAAAAGTA
GTTTTACGTATACGTGAAATGGAAAATTCAGAAAAATCAGTACCAATATCAGTTTTGCCA
AAAGTTTATTTCAATCCTAATTTATGTTACATTATTTGTGGTGGTCTCGGTGGTTTTGGA
TTAGAATTAACTGATTGGCTTATTTTAAGAGGATGCAAGAATATAATTTTAAGTTCAAGT
CGTGGAATTACAAATGATTATCAAAAAATTAGATTAAGTTTATGGAAAACATATGGTGTA
AAAGTCATCATAAGTACATCAGATATTACAACACGCGATGGATGTATTGAATTAATTACA
ACTGCATCTAATTTAGCACCAGTTGGTGGAATTTTTAATTTAGCTGTAAAACTTCGTGAT
GGAATTCTCGAAAATCAAGATGCAAAAACTTTTATTGAATGCATGGCACCAAAAGCTTTA
GCAACTAAATATCTTCATGAAGTTTCTCGGACTCGTTGTCCTCTTTTGCATGAATTTGTT
GTCTTTTCAAGTGTATCTTGTGGTCGTGGTAATGCAGGACAATCAAATTATGGAATGGCA
AATTCTGTAATGGAACGTATCATAGAACAACGTCATAAAATTGGATTACCTGGAAAAGCA
ATACAATGGGGAGCAATTGGTGAAGTTGGAATCGTTGCTGATATGCAAGAAGATAAAAAT
GATTTAGAAATCGGCGGAACATTACAGCAACGAATTTCATCATGTCTTGAAGTTCTTGAT
ACATTGATGACAGTGAAAAGTCCAATTGTCAGTAGCATGGTTGTTGCTGAAAAACACAAC
AAAAATGCTGGTAAAGATGGAATTGTTAAAATGATTCTGAATATAATGTCAATCAAAGAT
GTCAAAAGTCTTTCCATTGAAACAAAACTTTCTGAACTTGGCATGGATTCATTGATGACA
GTTGAAATTTCACAAGCACTTGAACGTGAATTTAATTTGTATATAACATCACAAGAGCTA
AGATCGATTACATTACAACAATTAAATGCTTTAGAAAAAGTTGGACATTTTGATGAAATT
GAAAATCAATCAATTAATAAATTTCAATTTCTTTTACCAAGTTTGGATGAAGAAAAAGAA
GCTTTTAAATCAATAATTAAACTTGAAAGTAACAATGATAATGGTGACAAAGTTCTTTTA
ATAACTGGAGTTGAAGGAGTCGGAGGAAAAAATTATAAAAATTTTGCACGTAATTTAAAT
AATCCTACGTATTTACTTCAGATGTCAAGTTGTTGGTATGCAAAAAGTCTTGATGAAATG
TATTCAGCTGTTGTTGATGATGTTTTAAAACTGTATGAGAATGAAAAATCCTTCTTGTTG
ATTGGTTACTCATTTGGTTCAATTTTAACATTGAAACTTGTAAGCGCTTTAGAATCGAAA
GGAAAAATTGGCAAAGTTATTTTAATTGATGGCTCACCAAAACTTATGCAACAAATTGTT
CTACAATTTTTACCATCAAGAATAAAAACTGAAAATGATATGGAAAATCTAGTTTTGAAA
CATTATTTTAGACTGATTTTTCCAAAAGAAAGAACTGATCGATTGAGCAAAATATTACAA
GAGAAAACTTGGGAAGAAAAAATGTTAAAAGTTGAAGAAATTCTTGTGAATTACAACTCA
CACAGTGAACAATTTATAAAAAATCTACTCTTTGGATTGCTTCAACGTATAAAAATTGCT
GCCAACTTAAATTTGAAATCATTCGATCAGCTCAGTTCACCAATTACTTTGATAAAACCA
AATGAAATTACATTACATGAAATTGAAGATGACTATGGCCTGCAAATTTATACTAAAAAC
AAAATTCAAATCAACTTTTTAAAAGGAAATCATTCTAATATTATTGAAAATTTTGATCTT
TCTTCACTTGTTAACAAAATTTTTTCTTAA

>g16032.t1 Gene=g16032 Length=2349
MTLSENRRILTRVKVDRDDEIIISGISGRFPNSKNVEELSYNLYNKIDMVDDVERRWKHL
NDEMPKRYGKTVNLEKFDASFFSINYKQAHNMDPQARILQEHAYEAIIDAGVAPKSLRGS
RTGVFISCCMTEADEHFYFGTAIKDGMGLTGSSRALLANRISFSMDLKGPSFTIDSACSS
SGYALDLAFNAIRTGECDAAIVGGSNLLLHPATTLQFYRLGVLSKDGYCRPFDKDATGYC
RSEAVTVIFLQKRKDAKRIYGELVYSKTNIDGFKNEGLTYPSGKIQIKLLAEFYKDLGID
PKTIDYIEAHCTGTKVGDPEECLALDTIFCNDRTKPLPVGSVKSNMGHTEASSTLCSIIK
SLLIFETKKIPPNIHFTAPRDDIPSLVDGRLKVVNEIEKFDGNLISVNSFGFGGANVHCL
LKRNPKQKENRGIPKDDIPRLVLWSGRTEKAVNSVLENISSQPLDAEFIALLQNSQISNP
SLNTYRGYGIYAKVNENTKCLAHHVNNFASSKRPIVFVYSGMGSQWSQMGTDLMKIPIFA
STIEKCHNILIENQINLKEIITSSDTLIFENILNSFVGIAAIQIGLTNIMNAIGLKPDFV
IGHSVGELGCAYADNCLTDEEMILCAYSRGMASLESKIIHGAMAAVSVGYDELKNMLIDG
VEIACHNSSDSCTISGPSELIDVFVKKLKEKNIFAKKVQSSNIAYHSSYIAPAGSNLLQR
LKTIIKNPKKRSSKWICSSVPKENWNDFDCRFSSAQYHSNNLLNAVLFHEASENLPKDAL
TIEIAPHGLLQSIIKRLLPDGLHFSLTKRGISDNSLYLIESLGKIFENGVDMDISAIYPQ
IEFPVSSGTPMISPLIKWDHTENWFVPKYDDKKHNDMQINISLQDSEFGFISGHEIDGRV
LFPATGYLFLTWKLAALQNKEFFDKFDVEFEDVKFLRACNIPADPNGIELTVVVQRGSGK
FEIIDGKNTVCTGIVRNASESKMRQFYHEDSKKIEVKAKDFYKELRLRGYNYKGLFKSVI
SSQSDGSSGDIKWQSNWIAFLDCLLQLKIFPRDTRSLVLPVGIKKLTIKTRDHLALASDL
DKNETFKAFYCSKMKILQCGGVEIRGVQTQTVNRRPPNGIPILESYQFIPHYKNLVLSKI
DIARFCIQLAIENFATAKISAVEIDMNDDKEPLCGYFYAGINEQPLITAELNYLTSRDDV
KIPYVNVTNEKFSSFNNSIFVIRSNCLSDNDFMESIALQTNEKCFILTRESLESSMNIIF
PQNVQIIAKFSSDNEIFVLLQYLKIKVNLPSNIIKITNDDFSWLDKLKSIAKSEPTIVYA
ENEEISGIIGLVNCIRKEPGCQMVRCFFIDDCNAPPFNIDDEFYKTQINKNLAMNVFRDR
QWGSYKHLLLDPIYEKIPQNGACYANVLTRGDLSSFKWFQSHLTDLSHKNVVKVHCSSLN
FRDVMLATGKLSADIFGNNRLDQMYLFGLEFSGITNNGRRVMGLRNCNAHATHILADKEL
LWDVPDNWTLEEAATVPCVYATVYASFFIATKIKSGKSILIHSGTGGVGLAAIQVALAYG
LEVFTTVSTEEKKKFLLEKFPQLNYLNIGNSRDTSFEDLIMERTCGKGVDYVLNSLAEEK
LLASLRCLSKGGTFFEIGKFDISNDNKLGLGEFIKEISFHTIFIDNYFEASSDKKKEIRE
LLDADIKKGIIKPLKMNVFNADEIVQAFKLLASGKHIGKVVLRIREMENSEKSVPISVLP
KVYFNPNLCYIICGGLGGFGLELTDWLILRGCKNIILSSSRGITNDYQKIRLSLWKTYGV
KVIISTSDITTRDGCIELITTASNLAPVGGIFNLAVKLRDGILENQDAKTFIECMAPKAL
ATKYLHEVSRTRCPLLHEFVVFSSVSCGRGNAGQSNYGMANSVMERIIEQRHKIGLPGKA
IQWGAIGEVGIVADMQEDKNDLEIGGTLQQRISSCLEVLDTLMTVKSPIVSSMVVAEKHN
KNAGKDGIVKMILNIMSIKDVKSLSIETKLSELGMDSLMTVEISQALEREFNLYITSQEL
RSITLQQLNALEKVGHFDEIENQSINKFQFLLPSLDEEKEAFKSIIKLESNNDNGDKVLL
ITGVEGVGGKNYKNFARNLNNPTYLLQMSSCWYAKSLDEMYSAVVDDVLKLYENEKSFLL
IGYSFGSILTLKLVSALESKGKIGKVILIDGSPKLMQQIVLQFLPSRIKTENDMENLVLK
HYFRLIFPKERTDRLSKILQEKTWEEKMLKVEEILVNYNSHSEQFIKNLLFGLLQRIKIA
ANLNLKSFDQLSSPITLIKPNEITLHEIEDDYGLQIYTKNKIQINFLKGNHSNIIENFDL
SSLVNKIFS

Protein features from InterProScan

Transcript Database ID Name Start End E.value
30 g16032.t1 CDD cd00833 PKS 19 421 6.13247E-144
31 g16032.t1 CDD cd05195 enoyl_red 1432 1722 1.71151E-101
29 g16032.t1 CDD cd08954 KR_1_FAS_SDR_x 1739 1976 2.71237E-60
21 g16032.t1 Gene3D G3DSA:3.40.47.10 - 19 423 8.7E-134
26 g16032.t1 Gene3D G3DSA:3.30.70.3290 - 438 866 3.6E-166
24 g16032.t1 Gene3D G3DSA:3.40.366.10 - 511 829 3.6E-166
27 g16032.t1 Gene3D G3DSA:3.10.129.110 - 874 1117 5.9E-68
20 g16032.t1 Gene3D G3DSA:3.40.50.720 - 1298 1975 1.2E-282
23 g16032.t1 Gene3D G3DSA:3.90.180.10 - 1392 1742 1.2E-282
22 g16032.t1 Gene3D G3DSA:1.10.1200.10 - 1980 2061 2.1E-16
25 g16032.t1 Gene3D G3DSA:3.40.50.1820 - 2097 2337 8.8E-36
28 g16032.t1 Gene3D G3DSA:1.10.1470.20 Fatty acid synthase; domain 2 2196 2283 8.8E-36
10 g16032.t1 PANTHER PTHR43775 FATTY ACID SYNTHASE 17 2348 0.0
11 g16032.t1 PANTHER PTHR43775:SF23 FATTY ACID SYNTHASE 3 17 2348 0.0
4 g16032.t1 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 19 256 6.9E-63
1 g16032.t1 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 376 4.6E-34
9 g16032.t1 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 379 490 2.1E-31
8 g16032.t1 Pfam PF00698 Acyl transferase domain 516 796 3.5E-60
3 g16032.t1 Pfam PF14765 Polyketide synthase dehydratase 882 1073 1.2E-12
5 g16032.t1 Pfam PF00107 Zinc-binding dehydrogenase 1547 1670 1.3E-15
2 g16032.t1 Pfam PF08659 KR domain 1750 1927 2.2E-37
6 g16032.t1 Pfam PF00550 Phosphopantetheine attachment site 1991 2048 1.9E-7
7 g16032.t1 Pfam PF00975 Thioesterase domain 2104 2336 6.6E-6
32 g16032.t1 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 169 185 -
33 g16032.t1 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2012 2027 -
38 g16032.t1 ProSiteProfiles PS50075 Carrier protein (CP) domain profile. 1979 2061 9.638
36 g16032.t1 SMART SM00825 Beta-ketoacyl synthase 21 426 4.4E-101
35 g16032.t1 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 518 811 2.1E-21
34 g16032.t1 SMART SM00829 PKS_ER_names_mod 1411 1722 1.4E-112
37 g16032.t1 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1748 1929 1.6E-17
14 g16032.t1 SUPERFAMILY SSF53901 Thiolase-like 15 423 1.03E-67
13 g16032.t1 SUPERFAMILY SSF52151 FabD/lysophospholipase-like 515 801 1.28E-37
19 g16032.t1 SUPERFAMILY SSF55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase 640 697 4.97E-8
17 g16032.t1 SUPERFAMILY SSF50129 GroES-like 1430 1542 1.34E-15
16 g16032.t1 SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains 1507 1669 1.46E-34
15 g16032.t1 SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains 1748 1940 2.59E-23
18 g16032.t1 SUPERFAMILY SSF47336 ACP-like 1986 2048 6.15E-9
12 g16032.t1 SUPERFAMILY SSF53474 alpha/beta-Hydrolases 2074 2345 8.28E-20

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0016746 acyltransferase activity MF
GO:0055114 NA NA
GO:0009058 biosynthetic process BP
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity MF
GO:0006633 fatty acid biosynthetic process BP
GO:0016740 transferase activity MF
GO:0004312 fatty acid synthase activity MF
GO:0016491 oxidoreductase activity MF

KEGG

Orthology

Pathway

This gene does not belong to any pathways.

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed