General information for g1715.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Gamma-aminobutyric acid type B receptor subunit 2.
Parent gene
- The parent gene g1715 is located on chr_3: 12669772..12675206 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_3 | g1715 | g1715.t1 | isoform | g1715.t1 | 12669772 | 12675206 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon1 | 12669772 | 12670499 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS1 | 12669772 | 12670499 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon2 | 12670791 | 12670937 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS2 | 12670791 | 12670937 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon3 | 12671349 | 12671379 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS3 | 12671349 | 12671379 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon4 | 12671465 | 12671824 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS4 | 12671465 | 12671824 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon5 | 12672024 | 12672542 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS5 | 12672024 | 12672542 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon6 | 12672668 | 12673003 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS6 | 12672668 | 12673003 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon7 | 12673058 | 12673376 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS7 | 12673058 | 12673376 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon8 | 12673454 | 12673520 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS8 | 12673454 | 12673520 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon9 | 12673586 | 12673853 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS9 | 12673586 | 12673853 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon10 | 12674080 | 12674209 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS10 | 12674080 | 12674209 |
| chr_3 | g1715 | g1715.t1 | exon | g1715.t1.exon11 | 12674491 | 12675206 |
| chr_3 | g1715 | g1715.t1 | cds | g1715.t1.CDS11 | 12674491 | 12675206 |
| chr_3 | g1715 | g1715.t1 | TSS | g1715.t1 | NA | NA |
| chr_3 | g1715 | g1715.t1 | TTS | g1715.t1 | NA | NA |
Sequences
>g1715.t1 Gene=g1715 Length=3621
ATGCTCTTGTTGGCGTTTGTGCTTTTGTTTTTCATCTCAACAAATGTGATTGAATGTCAA
CGACCGAGCTCTGGAGGCCGTATGGATGTTTATATTGCAGGCTTTTTTCCATATGGTGAT
CGTGTTGAAAATGCTGACATTGGTCGAGGTGTGATGCCAAGTGTTAAATTGGCACTCGAT
CATGTTAATGAACATTCGACAATTTTGAGAAATTATCGTCTACATATGTGGTGGAATGAT
ACAGAATGCAATGCAGCAGTTGGTGTCAAGTCATTTTTTGATATGATGCATAGTGGACCA
CATAAATTGATGCTTTTTGGTGCAGCTTGTACTCATGTTACTGATCCTATTGCTAAAGCA
TCTAAACATTGGCATCTGACTCAATTATCTTATGCTGACATGCATCCAATGTTTACAAAA
GATGGCTTTCCCAACTTTTTTCGTGTAGTACCAAGTGAGACAGCTTTTAATGCTCCACGT
TTAGCACTTTTAAGAGAATTCAACTGGACACGTGTTGGTACAATTTATCAAAATGAGCCA
CGTTATGCTTTGCCTCACAATTATATGGTAGCTGAATTAGATTCTATGGGTCTTGAAGTT
GTCGATACTCAAAGTTTTGCTACCGATGTCAAGGAGTCATTAGAGAAATTGCGCGAAAAG
GATGTGCGGATTATACTTGGAAATTTCAATGAGTTTTGGGCACGAAGGGTTTTCTGTGAA
GCGTTCAGGCTTGAAATGTATGGTCGCGCATATCAATGGCTGATAATGGGTCCATCACGT
AAGGATTGGTGGAAAGTCAATGACACCGATTGTACGGTCGATGAGCTGAAGCAGGCTCTC
GAATCAACAATAGCAACGGATTTATTGCCTTTGTCCACGTCTGGCGATATAACTGTGTCG
GGAACGACAGCAGAGGAGTACTTGAAAGAATACAATAGGCGTCGTGGTAACGAGTATTCA
CGCTTTCATGGTTATACATATGATGGAATATGGGCTGTAGCACTTGCTATTCAGTATGTT
TCACAGAAAAAGGATTCATTTTTGCAGAATTTTCATTATCGAGATAAAGAATGGGAAGCA
GTATTTCTTGAAGCTTTATCAAACACAAGTTTTGAAGGGGTAACTGGCCCAGTAAGATTT
TATAATAATGAAAGAAAAGCGAGTTTTCAATTAAATCAATTTCAAAATGGAGAAGAAACA
AAAATTGGTGAATATAGTTCTTTACAATCACGTTTAGATTTATCGAGAGGTCAACCATTA
AAATGGTTTGGACGATCACCACCAAAAGATAGAACATTACGTATAATTGAGCACGCTCAA
GTGAACTTGACTATTTATGTCATATTAGCAAGTTGTTCTGTTTTGGGAATTGTGCTAGCA
ATTAGCTTTCTTATCGTGAACATTAAATTTCGTAATCAACGCTATATAAAAATGTCAAGT
CCACACTTGAACAACTTAATCATTATTGGTTGCATATTGACCTACACTAGTATCATTTTT
CTTGGTCTCGATAGTGGTCTCAGTAGTGTAACTGCTTTTCCTTATATTTGTACCGCACGA
GCTTGGCTCTTGATGGCTGGCTTTTCACTCGCATTTGGTGCAATGTTTTCAAAAACATGG
CGCGTACATTCAATTTTCACTGATCTAAAACTCAACAAGAAAGTCATTAAGGATTATCAA
TTATTCATGGTTGTCGGAGTGCTTTTGGCAATTGATATTGCTATAATGACAACATGGCAA
GTGGCCGATCCATTTTTCCGAATGACAAAGCAATTGGAACCATATGCTCATCCTTCACTT
GAGGATGTTATAATTGTACGAGAGAATGAATATTGTCAATCTGAACAAATGAACATTTTT
GTTGGTGTTATTTACGCTTATAAAGGAATGCTGCTCATTTTCGGTGCTTTTCTTGCATGG
GAAACAAGAAATGTTTCAATACCAGCATTAAATGATTCAAAGCATATTGGTCTATCAGTT
TATAATGTTGTGATTATGTGTGTTATGGGTGCCGCAATAGCATTGGTTTTATCTGATCAA
AAAGATGCTGTTTTTCTACTCATTTCAATCTTTATCATGTTTTGTACAACTGTCACTCTC
ATTTTGGTGTTTGTTCCAAAGATAATTGAATTAAAACGAAATCCAAGTGGTGTAATTGAT
AAACGTGTACGTGCGACACTTCGTCCAATGTCAAAGGCTGATCGTCGTGATTCATCAGCA
TGTGAATTAGAGCAGAAGTTGCGTGATGTGAAATCCAATAATTGTCGCTTCCGTAAAGCA
TTGATGGATCGTGAGGCTGAATTACAAGCATTAATTAGAAAACTTGGACAAGAAGCATCA
AATTGGCTTGAAGGTGGAACAAGTGAAACTGAGCCAATATTGAAAGATCAAGGACGATTA
TCTGCTGGTCCAGTTAGAAGAGATCTTCCAAGTCAGACAGAACTCACCAGTATAGGAAGT
TGTATTTCAAGTCACGAAGATCTTGACAATAGCACGCCCGAGACGAGAAAGAAACGTGTC
AGCATTCAGAGTATGCAGGATAAGAATAAAATGAGCAATTCAATTTCACAGAGTAAAATG
AATGTTGAGCCGAAAGTTGTATCTACGCAAACGACAATTTCGAGTGCAACTATAACAACA
GCAGATGTAAAACCACAACAAGTTCAAGCACAAACACCTGACCACAAATCATATGTAACA
GAGATGCGGAAAGAGTTGTCGGAAGCTTCAACTGCTACACCTACATGGTCGCCTAGTCAT
AATGGTCATTATATGGATCAACATGAATATCAAACAGCGGCTAATTTAACGAAATTTAAC
ACTCATATGAATATGAATACCTCCATGACTCTGTCCAATACTGAGTTAAATAACATTTGT
CCACATGGAAAAGGAAGCACAAAGAATCTCAATATGGTAGAACAACGTCGCGTGTCCATG
GGTGCGGCAATGAAAGGCAATTTTGTTGTATCACAGAGTGATTTATGGGACACTCAAACT
TTGTCACATGCTAAGCAACACTCGCGACACTCACCACGCAATCAACAAGCACGCTGTCCT
GATCACACTTATGTTAATGCTCCACTGCAACAACAAGCAGCGCAATCAACGCCTTCATCA
TCAATAGCAACTACACCACAGCATGAGCAATATGATCAAAATGGATCGCCTGGTGGAATT
AGTACTGGAAGTGCAAGTGGAATGATGCAAAGAAGTGTCTCAGAGAAAAATCGAAAGCAT
CGGCATAAGCAAAAAATTGCAGTTTGTCAGAGTGAAACTGATAGTGAACGAGAGCAAAGA
ACAGCTCAATTGTGTGCTCAAAATCGTAAGCTAACTAAATCGCATCACTCTCATCATCAA
TCGACACCGAATGTCGCACCTGATGGCATGAAATCACACAAGCATCGATCAAAAAGTCGT
GATCATCATCATCATCATCGATCGTCATCAAATATGCATGGAGCATGTTCTGAATCAGAG
CTACTTGACAGTGACACCGCAATACTGCCGATATTTAGGAAATTATTAACAGAAAAGGAA
TCTAGATATAGGCCAAGTAGAAATGGCGCTAGTTGTCCCAACCTTCTATCTATTAAATGT
GATATTGTTGAATATTTGTAA
>g1715.t1 Gene=g1715 Length=1206
MLLLAFVLLFFISTNVIECQRPSSGGRMDVYIAGFFPYGDRVENADIGRGVMPSVKLALD
HVNEHSTILRNYRLHMWWNDTECNAAVGVKSFFDMMHSGPHKLMLFGAACTHVTDPIAKA
SKHWHLTQLSYADMHPMFTKDGFPNFFRVVPSETAFNAPRLALLREFNWTRVGTIYQNEP
RYALPHNYMVAELDSMGLEVVDTQSFATDVKESLEKLREKDVRIILGNFNEFWARRVFCE
AFRLEMYGRAYQWLIMGPSRKDWWKVNDTDCTVDELKQALESTIATDLLPLSTSGDITVS
GTTAEEYLKEYNRRRGNEYSRFHGYTYDGIWAVALAIQYVSQKKDSFLQNFHYRDKEWEA
VFLEALSNTSFEGVTGPVRFYNNERKASFQLNQFQNGEETKIGEYSSLQSRLDLSRGQPL
KWFGRSPPKDRTLRIIEHAQVNLTIYVILASCSVLGIVLAISFLIVNIKFRNQRYIKMSS
PHLNNLIIIGCILTYTSIIFLGLDSGLSSVTAFPYICTARAWLLMAGFSLAFGAMFSKTW
RVHSIFTDLKLNKKVIKDYQLFMVVGVLLAIDIAIMTTWQVADPFFRMTKQLEPYAHPSL
EDVIIVRENEYCQSEQMNIFVGVIYAYKGMLLIFGAFLAWETRNVSIPALNDSKHIGLSV
YNVVIMCVMGAAIALVLSDQKDAVFLLISIFIMFCTTVTLILVFVPKIIELKRNPSGVID
KRVRATLRPMSKADRRDSSACELEQKLRDVKSNNCRFRKALMDREAELQALIRKLGQEAS
NWLEGGTSETEPILKDQGRLSAGPVRRDLPSQTELTSIGSCISSHEDLDNSTPETRKKRV
SIQSMQDKNKMSNSISQSKMNVEPKVVSTQTTISSATITTADVKPQQVQAQTPDHKSYVT
EMRKELSEASTATPTWSPSHNGHYMDQHEYQTAANLTKFNTHMNMNTSMTLSNTELNNIC
PHGKGSTKNLNMVEQRRVSMGAAMKGNFVVSQSDLWDTQTLSHAKQHSRHSPRNQQARCP
DHTYVNAPLQQQAAQSTPSSSIATTPQHEQYDQNGSPGGISTGSASGMMQRSVSEKNRKH
RHKQKIAVCQSETDSEREQRTAQLCAQNRKLTKSHHSHHQSTPNVAPDGMKSHKHRSKSR
DHHHHHRSSSNMHGACSESELLDSDTAILPIFRKLLTEKESRYRPSRNGASCPNLLSIKC
DIVEYL
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 50 | g1715.t1 | CDD | cd06366 | PBP1_GABAb_receptor | 31 | 424 | 3.23223E-174 |
| 49 | g1715.t1 | CDD | cd15294 | 7tmC_GABA-B-R2 | 444 | 713 | 9.40675E-160 |
| 29 | g1715.t1 | Coils | Coil | Coil | 758 | 778 | - |
| 27 | g1715.t1 | Gene3D | G3DSA:3.40.50.2300 | - | 48 | 387 | 9.6E-132 |
| 28 | g1715.t1 | Gene3D | G3DSA:3.40.50.2300 | - | 152 | 405 | 9.6E-132 |
| 60 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 863 | - |
| 57 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 829 | 844 | - |
| 58 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 845 | 863 | - |
| 59 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1030 | 1072 | - |
| 61 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1030 | 1158 | - |
| 62 | g1715.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1135 | 1150 | - |
| 3 | g1715.t1 | PANTHER | PTHR10519:SF20 | METABOTROPIC GABA-B RECEPTOR SUBTYPE 2, ISOFORM C | 45 | 786 | 0.0 |
| 4 | g1715.t1 | PANTHER | PTHR10519 | GABA-B RECEPTOR | 45 | 786 | 0.0 |
| 22 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 48 | 64 | 1.7E-81 |
| 13 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 110 | 138 | 1.7E-81 |
| 6 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 115 | 132 | 2.9E-27 |
| 20 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 206 | 229 | 1.7E-81 |
| 24 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 236 | 259 | 1.7E-81 |
| 7 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 322 | 340 | 2.9E-27 |
| 21 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 326 | 338 | 1.7E-81 |
| 10 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 384 | 407 | 2.9E-27 |
| 5 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 444 | 469 | 2.9E-27 |
| 16 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 445 | 468 | 1.7E-81 |
| 23 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 484 | 505 | 1.7E-81 |
| 11 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 486 | 507 | 2.9E-27 |
| 15 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 517 | 536 | 1.7E-81 |
| 12 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 536 | 553 | 1.7E-81 |
| 18 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 565 | 590 | 1.7E-81 |
| 17 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 602 | 622 | 1.7E-81 |
| 19 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 651 | 674 | 1.7E-81 |
| 9 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 655 | 677 | 2.9E-27 |
| 8 | g1715.t1 | PRINTS | PR01177 | Metabotropic gamma-aminobutyric acid type B1 receptor signature | 682 | 705 | 2.9E-27 |
| 14 | g1715.t1 | PRINTS | PR01176 | Metabotropic gamma-aminobutyric acid type B receptor signature | 685 | 707 | 1.7E-81 |
| 1 | g1715.t1 | Pfam | PF01094 | Receptor family ligand binding region | 51 | 395 | 7.4E-41 |
| 2 | g1715.t1 | Pfam | PF00003 | 7 transmembrane sweet-taste receptor of 3 GCPR | 457 | 708 | 8.9E-62 |
| 38 | g1715.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 19 | - |
| 39 | g1715.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 1 | - |
| 40 | g1715.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 2 | 12 | - |
| 48 | g1715.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 13 | 19 | - |
| 34 | g1715.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 20 | 442 | - |
| 47 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 443 | 470 | - |
| 30 | g1715.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 471 | 481 | - |
| 44 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 482 | 501 | - |
| 37 | g1715.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 502 | 520 | - |
| 42 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 521 | 540 | - |
| 31 | g1715.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 541 | 560 | - |
| 43 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 561 | 582 | - |
| 35 | g1715.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 583 | 618 | - |
| 46 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 619 | 640 | - |
| 32 | g1715.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 641 | 659 | - |
| 45 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 660 | 677 | - |
| 36 | g1715.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 678 | 682 | - |
| 41 | g1715.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 683 | 705 | - |
| 33 | g1715.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 706 | 1206 | - |
| 63 | g1715.t1 | ProSiteProfiles | PS50259 | G-protein coupled receptors family 3 profile. | 452 | 727 | 28.488 |
| 25 | g1715.t1 | SUPERFAMILY | SSF53822 | Periplasmic binding protein-like I | 29 | 431 | 2.69E-72 |
| 26 | g1715.t1 | SignalP_EUK | SignalP-noTM | SignalP-noTM | 1 | 19 | - |
| 53 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 446 | 468 | - |
| 52 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 481 | 503 | - |
| 55 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 559 | 581 | - |
| 56 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 618 | 640 | - |
| 54 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 655 | 677 | - |
| 51 | g1715.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 684 | 706 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
## Warning: Removed 1 row(s) containing missing values (geom_path).
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | BP |
| GO:0004965 | G protein-coupled GABA receptor activity | MF |
| GO:0016021 | integral component of membrane | CC |
| GO:0004930 | G protein-coupled receptor activity | MF |
KEGG
Orthology
- This transcript has been annotated with K04615 (gamma-aminobutyric acid type B receptor)
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed