General information for g6177.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Dual oxidase.
Parent gene
- The parent gene g6177 is located on chr_2: 14921232..14930121 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_2 | g6177 | g6177.t1 | TTS | g6177.t1 | 14915901 | 14915901 |
| chr_2 | g6177 | g6177.t1 | isoform | g6177.t1 | 14916225 | 14930121 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon1 | 14916225 | 14916353 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS1 | 14916225 | 14916353 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon2 | 14916430 | 14916558 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS2 | 14916430 | 14916558 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon3 | 14916625 | 14916860 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS3 | 14916625 | 14916860 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon4 | 14916917 | 14917888 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS4 | 14916917 | 14917888 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon5 | 14917950 | 14919873 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS5 | 14917950 | 14919873 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon6 | 14920071 | 14920474 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS6 | 14920071 | 14920474 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon7 | 14920536 | 14920740 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS7 | 14920536 | 14920740 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon8 | 14920883 | 14921232 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS8 | 14920883 | 14921232 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon9 | 14927973 | 14928053 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS9 | 14927973 | 14928053 |
| chr_2 | g6177 | g6177.t1 | exon | g6177.t1.exon10 | 14930067 | 14930121 |
| chr_2 | g6177 | g6177.t1 | cds | g6177.t1.CDS10 | 14930067 | 14930121 |
| chr_2 | g6177 | g6177.t1 | TSS | g6177.t1 | NA | NA |
Sequences
>g6177.t1 Gene=g6177 Length=4485
ATGAAATGCATATTTGCAATTATTGTGATACAATTCGTGGACTTAACTGTTAATGAAAAA
TATTATAGTCATACTGAAAAGCAACGCTATGATGGCTGGTATAATAATTTGGCTCATCCG
GAATGGGGAGCGACAGATACACACTTAATACGCAAAGCACCGTCAGCTTATAGTGATGGA
GTTTATGGTATGGCTGGACCGAATCGTCCATCGCCACGGAAACTAAGTCGATTATTTATG
CGTGGTGAGGATGGTTTGAGTTCGATGGAAAATCGTACTGCTTTGTTGGCATTTTTCGGA
CAAGTCGTGACGAATGAAATTGTGATGGCGTCAGAATCGGGCTGTCCTATAGAAATGCAT
CGTATTGAAGTAGAGAAATGCGATGAGATGTATGACAAGGAGTGCCGTGGTGATCGTTAC
ATTCCATTTCATCGAGCTATGTACGATCGAAAGACGGGCCAAAGTCCAAATGCACCACGT
GAACAGATTAACCAAATGACAGCGTGGATCGACGGCAGTTTCATATATAGTACATCAGAA
GCATGGCTCAATGCAATGCGATCATTTCAAAATGGATCGCTTTTGACTGATAAAAGCGGC
AATATGCCCGTCAAAAATACAATGCGGGTGCCACTTTTCAACAATCCAGTGCCGCATGTC
ATGCGCGCTCTAAGCCCCGAGCGTTTATATCTGTTGGGCGATCCGCGCACTAATCAAAAT
CCCGCTTTGCTCTCGTTTGCCATACTACTCATGCGTTGGCACAATGTGCAAGCGCAAGAA
GTTAAACGACTTAATCCTGACTGGAGTGATGAAGAAATTTTTCAACGTGCGAGACGTCAA
GTGATTGCAAGTTTGCAGAGTATTTTTGTTTATGAATATTTACCTGCATTTCTGGGCGGA
ACGACACTTGAACCATATAGTGGTTATAAACAAGATGTCCACCCAGGCATTTCACATATG
TTCCAAGCTGCTGCTTTTCGATTTGGTCATTCTCTTATTCCACCTGGCATTATGAAAAGA
GATGGCAAATGTAACTTCAAATATACACGAGGTGCACCAGCAATCCGTCTTTGTTCAACA
TGGTGGGATTCCAGTGATATTTTCGAAGACACGAGCATTGAAGAGTTTCTTATGGGCATG
GCATCACAATTAGCCGAGAGAGAGGATCCCTTTCTTTGCTCTGACGTACGCGACAAACTT
TTTGGACCAATGGAATTTACAAGACGCGATCTTGGCGCTTTGAACATCATGCGTGGCCGT
GACAATGGTCTCGCCGATTATAACACAGCACGAGCCGCCTATAAACTACCAAAACATACA
AATTGGAAAGACATCAACCCAGAGTTATTTGAAAAGCATCCCGAATTGCTACAAATTTTA
ATTTCCGCCTACAAAGATAGACTAGACAATGTTGATGCCTATATAGGCGGCATGCTTGAA
TCGAATGGTAAACCTGGTGAACTTTTTACAAAAGTGATAATCGATCAATTTACAAGAATT
AGAGACGCTGATCGTTACTGGTTTGAAAATGAAGACAATGGCATCTTTACGAAGGAAGAG
ATCGAAAAGTTCCGTAATATTAAACTCTACGACATCATTGTCAATAGCACGAGCATTGAG
GCGGGGCAAATTCAACGTAATGTATTTCAATTTGTCGATGGCGACCCTTGCCCTCAGCCA
GAGCAACTGAATGCATCACTGTTGGAACCATGTAGTCACATTGAAGGCTTTGATTATTTC
TCTGGCTCTGAACTTGCTTACATTTATGCATGTGTTTTTCTTGGGTTTGTACCAATTTTA
TGTGCAACTGCTGGTTATTGTGTGGTAAAACTTCAAAATCGACGAAGAAGAAGATTGAAA
GTGAAACAAGAAACAATGCGAACAAAGGGTGGTAAACAGACTGTTGACAAGATGATTGCT
CGAGAATGGTTGCATGCAAACCATAAAAGACTTGTTACAGTAAAATTCGGACCAGAATCA
GCTATTTATACGGTTGACAGAAAAGGCGAAAAGTTGCGAACTTTCAATCTCAGAAATGTC
GATTCAATTCAAGTTGAATTGAGTGTTGAAAGTTATACAAATAAACGACCATTGGTACTA
TTGAGAATACATAATGATCACGATTTGGTACTAGAATTAGAGACAATTGGAGCGCGTCGC
AAGTTCGTCAAAAAGTTGGAAGATTTTCTCATTTTGCATAAGAAGGAAATGTCAATTAAT
GAGCAAAATCGTGAACTGATGCTTGCAAAAGCAGAAACACGAGAACGAAGACAGAAAAAA
CTAGAGCACTTCTTCCGAGAAGCTTATGCATTGACATTTGGCTTAAGACCTGGTGAGAGA
AGAAGACGTTCAGATGCATCAAGTGATGGTGAAGTTATGACTGTTATGCGAACAAGTTTA
TCAAAATCTGAATTCGCTGCAGCTCTTGGAATGAAACCAGATGCAATGTTTGTGAGAAAA
ATGTTTAATATTGTTGATAAAGACCAAGATGGAAGAATTTCATTCCAAGAATTCTTAGAA
ACAGTTGTACTTTTCTCACGTGGAAAAACTGAAGATAAATTAAGAATTATTTTTGACATG
TGTGATAATGATCGAAATGGTGTTATAGATAAATCAGAATTCGGTGAAATGATGAGATCT
TTAGTTGAAATTGCAAGAACAACAAGTTTAACTGACGATCAAGTAACTGAATTGATTGAC
TGCATGTTCTCGGACAGTGGACTTGAGCATAAAAATCATTTAACGTATAAAGATTTCAAA
GAAATGATGAAAGAATACAAAGGTGAATTTGTGGCTATTGGTTTGGATTGTAAAGGTGCA
AAACAAAATTTCTTAGACACTTCTACAAATATTGCTCGCATGACTTCATTTGCAATTGAA
CCGACAGAAAGTGAAAAACATTGGATACTTGAAAAATGGGATACATATACAACATTTTTG
GAAGAAAATCGTCAGAATATTTTCTATCTATTTCTCTTTTATGTCATTACAATTGCACTC
TTTGTCGAAAGATTTATTCATTATTCATTTATGGCTGAACATACAGATTTACGACACATT
ATGGGTGTGGGAATAGCAATTACTCGAGGCTCTGCTGCAGCGCTTTCCTTTTGTTACTCA
CTCCTTCTGCTCACAATGTCACGAAATTTTCTCACAAAACTCAAAGAGTTTCCCATTCAA
CAATACATTCCACTTGATTCACATATTCAATTCCATAAGATTGCCGCATGCACAGCTCTA
TTCTTTTCTCTTTTACATACAGTCGGTCACATTGTGAATTTCTATCACGTCTCAACACAA
TCGCATGAAAATTTGAGATGTCTAACAAGAGAAGTGCATTTTGCATCCGACTATAAACCT
GACATTACTTTTTGGCTTTTTAAAACTCTTACTGGCACAACTGGAGTTGCTCTCTTTGTA
ATTATGTGTATTATATTTGCCTTTGCTCATCCAACTATAAGAAAGCGTGCTTATAAATTC
TTCTGGAATACACATTCACTTTATATCCTTCTCTACATTCTCTCATTGCTTCATGGACTT
GCACGATTGACTGGTGCACCACGTTTTTGGATGTTCTTCATTGGTCCAGCAATAATTTTT
GTTATCGATAAAGTTGCTTCACTGCGCACAAAATACATGGCACTCGATGTCATTGATGTT
GAACTTCTTCCTTCAGATGTTATAAAAATTAAGTTTTATCGTCCGCCAAATTTAAAATAT
TTATCTGGACAATGGGTTCGATTTTCATGCACTGCCATTAAGCCTGAAGAAATGCATAGT
TTTACACTGACATCAGCGCCACATGAAAACTTTTTAAGCTGCCACATTAAAGCACAAGGT
CCATGGACATGGAAACTTAGAAATTATTTCGATCCTTGTAATTATAATCCTGATGATCAA
CCAAGGATCAGAATTGAAGGTCCATATGGTGGTGGCAATCAAGATTGGTATAAATTTGAA
GTTGCTGTCATGGTTGGTGGTGGAATTGGAGTGACACCATATGCAAGCATTTTAAATGAT
TTAGTCTTTGGAACAAGCACAAACAGATATTCTGGAGTAGCTTGTAAAAAAGTATATTTC
CTTTGGATTTGTCCATCACACAAACATTTTGAATGGTTCATTGATGTTTTACGTGATGTT
GAGAAGAAAGATGTGACAAATGTTTTGGAAATTCACATTTTCATTACTCAATTTTTCCAT
AAATTTGATTTAAGAACAACAATGTTGTACATTTGCGAAAATCATTTCCAACGACTGTCA
AAAACATCAATGTTTACGGGCCTTAAAGCAGTTAATCACTTTGGTCGTCCTGATATGTCT
AGCTTCTTAAAGTTTGTTCAGAAGAAACATTCATATGTGTCGAAGATTGGAGTGTTTTCA
TGTGGACCTAGACCGCTTACTAAGAGTGTTATGTCGGCGTGTGACGAAGTCAACAAAGGT
CGTAAACTTCCATACTTTATTCATCACTTTGAGAATTTCGGATAA
>g6177.t1 Gene=g6177 Length=1494
MKCIFAIIVIQFVDLTVNEKYYSHTEKQRYDGWYNNLAHPEWGATDTHLIRKAPSAYSDG
VYGMAGPNRPSPRKLSRLFMRGEDGLSSMENRTALLAFFGQVVTNEIVMASESGCPIEMH
RIEVEKCDEMYDKECRGDRYIPFHRAMYDRKTGQSPNAPREQINQMTAWIDGSFIYSTSE
AWLNAMRSFQNGSLLTDKSGNMPVKNTMRVPLFNNPVPHVMRALSPERLYLLGDPRTNQN
PALLSFAILLMRWHNVQAQEVKRLNPDWSDEEIFQRARRQVIASLQSIFVYEYLPAFLGG
TTLEPYSGYKQDVHPGISHMFQAAAFRFGHSLIPPGIMKRDGKCNFKYTRGAPAIRLCST
WWDSSDIFEDTSIEEFLMGMASQLAEREDPFLCSDVRDKLFGPMEFTRRDLGALNIMRGR
DNGLADYNTARAAYKLPKHTNWKDINPELFEKHPELLQILISAYKDRLDNVDAYIGGMLE
SNGKPGELFTKVIIDQFTRIRDADRYWFENEDNGIFTKEEIEKFRNIKLYDIIVNSTSIE
AGQIQRNVFQFVDGDPCPQPEQLNASLLEPCSHIEGFDYFSGSELAYIYACVFLGFVPIL
CATAGYCVVKLQNRRRRRLKVKQETMRTKGGKQTVDKMIAREWLHANHKRLVTVKFGPES
AIYTVDRKGEKLRTFNLRNVDSIQVELSVESYTNKRPLVLLRIHNDHDLVLELETIGARR
KFVKKLEDFLILHKKEMSINEQNRELMLAKAETRERRQKKLEHFFREAYALTFGLRPGER
RRRSDASSDGEVMTVMRTSLSKSEFAAALGMKPDAMFVRKMFNIVDKDQDGRISFQEFLE
TVVLFSRGKTEDKLRIIFDMCDNDRNGVIDKSEFGEMMRSLVEIARTTSLTDDQVTELID
CMFSDSGLEHKNHLTYKDFKEMMKEYKGEFVAIGLDCKGAKQNFLDTSTNIARMTSFAIE
PTESEKHWILEKWDTYTTFLEENRQNIFYLFLFYVITIALFVERFIHYSFMAEHTDLRHI
MGVGIAITRGSAAALSFCYSLLLLTMSRNFLTKLKEFPIQQYIPLDSHIQFHKIAACTAL
FFSLLHTVGHIVNFYHVSTQSHENLRCLTREVHFASDYKPDITFWLFKTLTGTTGVALFV
IMCIIFAFAHPTIRKRAYKFFWNTHSLYILLYILSLLHGLARLTGAPRFWMFFIGPAIIF
VIDKVASLRTKYMALDVIDVELLPSDVIKIKFYRPPNLKYLSGQWVRFSCTAIKPEEMHS
FTLTSAPHENFLSCHIKAQGPWTWKLRNYFDPCNYNPDDQPRIRIEGPYGGGNQDWYKFE
VAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVACKKVYFLWICPSHKHFEWFIDVLRDV
EKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKTSMFTGLKAVNHFGRPDMS
SFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKGRKLPYFIHHFENFG
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 47 | g6177.t1 | CDD | cd09820 | dual_peroxidase_like | 30 | 583 | 0.0 |
| 45 | g6177.t1 | CDD | cd00051 | EFh | 785 | 840 | 5.97006E-7 |
| 46 | g6177.t1 | CDD | cd00051 | EFh | 818 | 879 | 1.82628E-14 |
| 44 | g6177.t1 | CDD | cd00051 | EFh | 853 | 924 | 5.79697E-7 |
| 48 | g6177.t1 | CDD | cd06186 | NOX_Duox_like_FAD_NADP | 1217 | 1399 | 1.91204E-46 |
| 24 | g6177.t1 | Coils | Coil | Coil | 732 | 752 | - |
| 21 | g6177.t1 | Gene3D | G3DSA:1.10.640.10 | Myeloperoxidase | 13 | 578 | 1.2E-149 |
| 23 | g6177.t1 | Gene3D | G3DSA:1.10.238.10 | - | 780 | 933 | 3.0E-29 |
| 22 | g6177.t1 | Gene3D | G3DSA:2.40.30.10 | Translation factors | 1202 | 1291 | 9.5E-11 |
| 20 | g6177.t1 | Gene3D | G3DSA:3.40.50.80 | - | 1303 | 1493 | 3.2E-48 |
| 7 | g6177.t1 | PANTHER | PTHR11972 | NADPH OXIDASE | 113 | 1493 | 0.0 |
| 8 | g6177.t1 | PANTHER | PTHR11972:SF175 | DUAL OXIDASE | 113 | 1493 | 0.0 |
| 14 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 51 | 62 | 1.5E-16 |
| 9 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 95 | 110 | 1.5E-16 |
| 12 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 230 | 248 | 1.5E-16 |
| 13 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 248 | 268 | 1.5E-16 |
| 11 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 273 | 299 | 1.5E-16 |
| 10 | g6177.t1 | PRINTS | PR00457 | Animal haem peroxidase signature | 323 | 333 | 1.5E-16 |
| 4 | g6177.t1 | Pfam | PF03098 | Animal haem peroxidase | 28 | 549 | 3.5E-153 |
| 2 | g6177.t1 | Pfam | PF00036 | EF hand | 818 | 840 | 7.6E-7 |
| 1 | g6177.t1 | Pfam | PF13499 | EF-hand domain pair | 852 | 924 | 1.7E-8 |
| 5 | g6177.t1 | Pfam | PF01794 | Ferric reductase like transmembrane component | 1031 | 1175 | 1.7E-18 |
| 6 | g6177.t1 | Pfam | PF08022 | FAD-binding domain | 1216 | 1310 | 7.7E-18 |
| 3 | g6177.t1 | Pfam | PF08030 | Ferric reductase NAD binding domain | 1319 | 1474 | 3.3E-25 |
| 33 | g6177.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 15 | - |
| 34 | g6177.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 2 | - |
| 35 | g6177.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 3 | 10 | - |
| 43 | g6177.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 11 | 15 | - |
| 31 | g6177.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 16 | 585 | - |
| 36 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 586 | 609 | - |
| 28 | g6177.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 610 | 986 | - |
| 39 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 987 | 1007 | - |
| 32 | g6177.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1008 | 1018 | - |
| 42 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1019 | 1044 | - |
| 26 | g6177.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1045 | 1073 | - |
| 38 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1074 | 1095 | - |
| 29 | g6177.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1096 | 1124 | - |
| 41 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1125 | 1148 | - |
| 25 | g6177.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1149 | 1159 | - |
| 37 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1160 | 1181 | - |
| 30 | g6177.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1182 | 1186 | - |
| 40 | g6177.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1187 | 1206 | - |
| 27 | g6177.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1207 | 1494 | - |
| 60 | g6177.t1 | ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 826 | 838 | - |
| 59 | g6177.t1 | ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 862 | 874 | - |
| 62 | g6177.t1 | ProSiteProfiles | PS50292 | Animal heme peroxidase superfamily profile. | 18 | 572 | 107.324 |
| 63 | g6177.t1 | ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 813 | 848 | 13.23 |
| 65 | g6177.t1 | ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 849 | 884 | 13.872 |
| 64 | g6177.t1 | ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 894 | 929 | 7.093 |
| 61 | g6177.t1 | ProSiteProfiles | PS51384 | Ferredoxin reductase-type FAD binding domain profile. | 1210 | 1315 | 13.77 |
| 67 | g6177.t1 | SFLD | SFLDG01169 | NADPH oxidase subgroup (NOX) | 23 | 1493 | 0.0 |
| 68 | g6177.t1 | SFLD | SFLDG01168 | Ferric reductase subgroup (FRE) | 986 | 1481 | 0.0 |
| 66 | g6177.t1 | SFLD | SFLDS00052 | Ferric Reductase Domain | 987 | 1481 | 0.0 |
| 58 | g6177.t1 | SMART | SM00054 | efh_1 | 817 | 845 | 2.5E-5 |
| 57 | g6177.t1 | SMART | SM00054 | efh_1 | 853 | 881 | 1.2E-4 |
| 56 | g6177.t1 | SMART | SM00054 | efh_1 | 898 | 926 | 150.0 |
| 16 | g6177.t1 | SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 24 | 583 | 2.0E-152 |
| 17 | g6177.t1 | SUPERFAMILY | SSF47473 | EF-hand | 799 | 926 | 1.06E-28 |
| 15 | g6177.t1 | SUPERFAMILY | SSF63380 | Riboflavin synthase domain-like | 1213 | 1311 | 3.19E-13 |
| 18 | g6177.t1 | SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1322 | 1479 | 4.32E-11 |
| 19 | g6177.t1 | SignalP_EUK | SignalP-noTM | SignalP-noTM | 1 | 18 | - |
| 53 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 586 | 608 | - |
| 54 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 986 | 1008 | - |
| 52 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1023 | 1045 | - |
| 49 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1074 | 1096 | - |
| 51 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1126 | 1148 | - |
| 55 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1160 | 1179 | - |
| 50 | g6177.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1189 | 1208 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0016174 | NAD(P)H oxidase H2O2-forming activity | MF |
| GO:0020037 | heme binding | MF |
| GO:0055114 | NA | NA |
| GO:0006979 | response to oxidative stress | BP |
| GO:0004601 | peroxidase activity | MF |
| GO:0005509 | calcium ion binding | MF |
| GO:0050665 | hydrogen peroxide biosynthetic process | BP |
| GO:0016491 | oxidoreductase activity | MF |
KEGG
Orthology
- This transcript has been annotated with K13411 (dual oxidase [EC:1.6.3.1 1.11.1.-])
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
