Chromosome | Gene | Transcript | Category | ID | Start | End |
---|---|---|---|---|---|---|
chr_2 | g8007 | g8007.t1 | isoform | g8007.t1 | 27815302 | 27822355 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon1 | 27815302 | 27815436 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS1 | 27815302 | 27815436 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon2 | 27815503 | 27815687 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS2 | 27815503 | 27815687 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon3 | 27815740 | 27816037 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS3 | 27815740 | 27816037 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon4 | 27816104 | 27816876 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS4 | 27816104 | 27816876 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon5 | 27816931 | 27821891 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS5 | 27816931 | 27821891 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon6 | 27821949 | 27822203 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS6 | 27821949 | 27822203 |
chr_2 | g8007 | g8007.t1 | exon | g8007.t1.exon7 | 27822261 | 27822355 |
chr_2 | g8007 | g8007.t1 | cds | g8007.t1.CDS7 | 27822261 | 27822355 |
chr_2 | g8007 | g8007.t1 | TSS | g8007.t1 | NA | NA |
chr_2 | g8007 | g8007.t1 | TTS | g8007.t1 | NA | NA |
>g8007.t1 Gene=g8007 Length=6702
ATGACAACTAAAGGAAAAATTGATGCAAATTTAATAAATGACCCTCTTGCGTCTAAAGAG
TCGTCGTATCCACTAACTAAGAATGAAAAATTAAGACCACGAATGAGCATGAGTCGCCAT
TTTCTTGGAAAAGATATCCCACGAGATTTTCAAATGGCAACAACGGAAGAATTTGTGAAA
CGTTTTAATGGCACATTTGTGATTGATAAAATTCTTGTTGCAAATAATGGTTATGCTGCA
GTCAAATTTATTCGATCAATTCGACGTTGGTGTAAAGATACATTCAAAAATGAAAAGGCT
ATCAAAATTATTGTATTAGCAACACCCGAAGATTTAGCAATGAATGCAGAATTTATAGAA
CTTGCTGACCATTGTGCATCAATTTCTGGTGGAACTGAAAATTTTTCAAACATTGAGCTC
ATTTTAGATGCTGCAAAGAGAGCAAAAGCTAATGCAGTCTGGCCTGGTTGGAATGCAGGA
GAGAAAAATTTAAAGCTTGCTGAAACGCTTCAAAAGAAAGATATTGCATTTCTTGGTCCT
TCTTATCAAAGTCTATCACTCGCTAGTGACACAATCAATACATTTATTATTGCACAAACA
ATTGATATTCCAACAATTCAATGGAATGGATCATCATTGAAACTTTACTCATACTCAACT
GGCAAAAAGGTAAAGATTACTGACGACCTCTATGATCAAGCTGCTATCACAAACATTGAT
CAAGCTAATCAAATAGCCAAAAATATTGGATTTCCAGTTGTTATCAAATCAGCTAAAGGA
GGTGAAAAAAGTTATCGCATAATTGAACACAATTCAGATTTTTCTGCAAAATTTCATCAA
TTACTCAATGAATACCAATCACCTGTTATTATTATGAAGCATATTCCAGAAGCTCGTTAT
GTTGAGATCCCATTGATTGGTGACAAAGAAGGCAATGTAATTTCAGTTTTTACTCGAGAT
TGTACTATTAAAAGGCAAAATTTGAATATAATTGAAGAAGCGCCGGCCATTTTTACAATG
CCAAAGTACTTTGATGATATGGAACGAGCAGCAATTCAAATAGCAAAAGTATTGAGATTT
GAAGGAGTTGGAAGTGCACTTTTCCTCTACAATCCTGCTGAAAGCAAATTTTTCTTTTAT
GATTTCTCTCCTTATTTGCAAATGGAACACGCTTGTACTGAAATGCTTGCCAGTATGAAT
CTCTGTGCATGTCAAGTGCAAGTCGCTATGGGAATTTCTCTTAATCGCATCAAAGATATA
AGAATGATGTTGAATGAATCAGCTTGGGACAATACTCCTATTGATTTTGAGAAAACAGTT
AAGAAGCAAAGATCATTTGGTCATGTAATTACAGCACGTATAACTGCTGATGAATTGATA
GAATCGTTTAGACCTTTGAAAGGAGGAAGCATTAAAGAATTAAATTTTCGATCAACAAGA
GATGTTTGGGGATATTATCATTCAAATAACTATCAGCATGTGAGTAGTACACCTTATGGA
CATTGTTTTGCATGGGGTGATACACGAAATGAAGCGCGTCAAAATTTAATCATGGCATTG
AAAGAACTCTCAAATATAAATGAAATAGCCACATGTATTGAATATTTATCAACATTATTA
GATTCAAGTGAATTTGTTCATAATGCATTTTATGCATCATATTATGATCGAATTATTGCT
GAAAAGACAAAAGTTACTGGAAAGCCTGAGACACTTATGGGTGTGATTGCAGCTTCCATT
CATATTGCTGATAGACATATTAATAAATTATTTAGCGAATATCAAGCACAACTCGAGAGA
GGTCAAATCACATGTCCTGATTCATTAACAAATTTCTGTGAAGTTGAAATGATTTCGGAC
AATTTAAAATACAATGTCGTTGCAGTAAAAACTGGTGAAAATCTTTACACACTCATAATG
AATGATTGCTATAAAGAAGTCAGTATTCATCGATTACCTGATGGTGGAGTTTTTATGACT
TTTGACAGTACAAGTCATACAACACATTTGAAGGAAGAATTTGGGCGTTATTATGTGACT
GTGGGCAATAAAAATTGCGTGTTCTATAAAGATTTTAATCCATCTATATTAAGAAGTCCA
TCACCAGGTAAACTTATTTGTTGGCTTGTAAATGATGGTGATGAGTTGGTTAAAGATCAG
CCATATGCTGAAATTGAAGTGTTGAAATCAATTTTGACACTTTATTGTCAAGAAAATGGA
ATTATAAGAATTATTAAAAATCCTGGTGAATATCTCGAGCGTGACACTATTATTGGCCAT
CTAGAGCTTGACTATACGACATCAATACCAGAAGTTGAAAAATATACTGGTGGTTGGCTA
CTTGGAGAATCATATCTTAAACAAGAAGGTCACATTCGAATGTTGAGCAAATACAAAACA
ATTTTGGGAAATAGCCTTGCTGGCTTCTGTTTTCCTGAACCTTATAATGAATCGTATTCT
CGTAAAGCAGTCAAAAATTTTATAAATCATTTAAAAAGTCCGAAATTACCATTAGAAGAA
CTTAATGAAATTATGAAAAAATATTCAAGTCGACTTCCGCAAACAGTTGAGCAGCGAATC
AGAGGACTAATGAAATCTTATGAAAGTAATTTGGACAGCATTGTGGCAAATTTTCCAGCT
GGAAAAATCGCATTCGTGATTGACGACTATGCATCATCAATTCAAAAAGTTCGTGATCGT
GATGCATTTTTCATCACAGTTCAAGAAATTCTACAATTAATTCAACGCTATCGTAGTGGT
ATACGAAATCATATGAAGAATGTTGTTAACATGCTCCTCAAGCAGTATTACGAGGTCGAA
TGTCATTTTCAGTATGCGCACTATGACAAATGTGTTTCGCAAATCCGTGAAAACTACAAA
GAGGACATGCAAACGGTTATGAACCTGATTTTCTCACACTCACAAGTTGGTAAAAAAAAT
TTTCTTATGATGTTACTGCTAGACGAGGCACTGAAAGATTCTGAGGGCTTAACGGATGAT
GTTGCTAATACTTTAAACGACCTCACAACGCTCACCTGTGAAGAACATTCACGTGTTGCT
TTGAAAGCACGAAAATTCTTAATCACAGCACATACACCATCATATGAAATAAGACGCAAT
CAGTTAGAGTCGATTTTGTTGTCAGCAGTTGATACACGAGGATCAAATGGAGTAAATACT
GAAAGTGTGCAACATTTGATTGAATCACAAACGGCCATTTTTGATGTTTTGCATGAGTTT
TTCTTTTCACCAAGTATTACTTTGTGCAATATTGCAATGGAAATTTATATTCGTCGAATT
CGTTTGCCACATGAATTGAGTTCTGTGCAACATTGTGAGCATCGATTGAATCATAACCGG
AGTTTTATTCCAGCTGTGTATTATACATTTAGACTTCCAAAAACACATCTCGAAACAGTT
GATAAACAAAAAGTTATACCCTTAAGAATAGGATGCATAACAGCTATAAATGGAATAGAA
TATTTCTATGAATTAATTGATGTTATTCTTAGTTATTTTGAGAGCAACATCCCAATGACA
AGTAATGAGCCAATTTATATTATTTATATTGCTGTAAAAGGTCTTAGTGACTTACCTGAT
GATCAAATGTCGTATCTTCTTCAATCCTTATGCTTACAACAACGAGATGATTTGCTGACG
AGAAAAGTTAGAAGAATAACATTTTTAATTCTGAAAGACAAAAGTTTTCCAAAACTCTTT
AATTATCGTGCTCGTGATAATTACGAAGAAGATCGAATAACACGAAGTATGGAACCTGCT
GGCTTTTATCAACTTGAAATCAACAGATTAAAATTGTATGAAATTCAGCGATTACAGACT
GAAAATTGTCGAATGAATTTGTATTTGGGCACAGCTTCTGTAGGTGAAGATAGAAAACTT
AACGATTTTCGTTATTTCATTCGTGCAATTGTTCGACATTCTGATTTGATCACAAATTCT
ACATCTTTTGAATCTTTACTGAATGAAGGAGAGCGTGTCTTATTAGAAGCTATTGAGGAG
CTAGAAATTGCCATGGCTTTGCCTCAAGCAAAAAAAACTGACTCTAATCATATTTTCATG
GCTTTCTTACCTTGTGTTATAATGGATCCAATTGTTACTCAAACAGAAATTAATAAAATG
ATTTCAACTTATGCAACACGATTGTGGAAATTGCGGGTGCTACAAATTGAAATGAAATTC
ATATTACTTACACACAAGAATGAAAAGAAAAATTATCGACTTTTTGTGACAAGTGAATTG
GGATACTTTATGGATGTTTCAATGTATGGGGAAATTCTTGATACTCGCGATAATATTTTA
AAATTTAAATCAATTAATGCTGAACTACCTGGTCCATTTGATAATTTACCGATAGCAACA
CCATATAAAACTCGTGATTATATTCAACGAAAAAGATTTCTTGCACAATCAAAAGGCACA
ACTTATTGTTATGATTTTCCTGACATGTTTCGTCAAATGAGTGAAAAGCTTTGGCATGAG
TTTATTACAGCAAGATTAAATGAACAAATTCATCGTCCAAATCAAGTGCTTATTGAGTGC
AATGAGTTGATTCTTATTGGTGAGAAATTGGCAGAAGTGAAACGACCACCTGGTGAGAAT
GAAATGAGCATTGTTGCATGGAAACTGAAATTGGCTACACCAGAATTTCCTGATGGTCGT
GAGCTGATTCTTATAGCTAATGATTTAACAGCATCATATGGTGCAATAAGCATACACGAG
GCACTTTTCTTTGAAAAAGTTTCACAATTGGCTCGTTTAAGGAAAATTCCAAGAATTCTC
ATTTCTGCAAGTACAGGCGTGCGTGTTGGTCTTGATGATGAGTTGAAATCAATGTTCAAA
ATTTCATGGAGAGATCGAAAAGATTTGGATAAAGGCTGTAAATATATTTATCTTCTATCA
GAGGATTACAGTGCGATTTCAGACCAAGATATTTTACGTACGGTGCTGATCGAGGATGAA
GGTGAATCAAGATATCGTATAACTGACGTAATTGGATTAAAAGAAGGCCTCGGCATTGAG
AATCTTCACTTTGCAAGCATGATAGAGAGCGAGACGGTACAAGCATACAATGAAATTGTA
ACAATTTCTATGGTGACATCTCAGACGATTGGAATTGGAGCACAAATTGTAAAACATGGT
AAACGAGTTGTTCAAATTGAAGACTCAGCATTAGTCTTGGCAAATTATACGTCACTCAAT
AGAAACTTAGGTTTTGAGGCTTATACATCAAATCAACAGATTGGCGGTTGTGAAATTATG
TCTAAAAATGGAACTACACATAAAGTCGAAGCTGATGATTTGGACGGAATTTATACAATT
TTGCATTGGCTTTCATATATGTCTGATAAAAGTGGCGGCAATTTACCAATTGTCATTCCA
AGTGATCAAATCAATCGAAAAATTGATTTTACACCAACCAAAAGTCTTTTTGATCCAAGA
ATGATGCTAAGTGGACGTTTTTGGCGCGATAGATGGGAATCAGGCTTTTTTGATCGTTAT
TCATGGTCTGAAATAAAACAATATTATGCACCATCAGCAATTACAGGACGCGCACGATTA
GGAGGAATTCCTGTTGGTGTGATTGCTGCAGAAATGAGGACAAGTGAAGTAAAAATTCCA
GCTGATCCTGGTCAATTGAATTCTCAAGAGAAAATTGTTAGTCAAATTGGAAATTACTTG
TATCCAGATTCAGCTCAGAAAATTGCACATGCAATTAAAGATTTTAATCGTGAAGATCTT
CCATTAATTATATTTGCCAACTGGCATGGCATTTCATCTGGACAAAGCAGTATGATGAAT
GGATTATTAAATTACACAACATTGATTGTTGAAGCTTTACGTGAATATAAGCAACCAGTT
TTTATTTATTTACCGCCACATGCAGAAATGAGAGGTGGAACATGGAATCTTTTCAGTTCA
TTCATCAATCCACATTTTATTGAGATGTACGCTGATGTTGAAACAAAAGCTGGTGTTGAT
AATCCCGAAAGTGATGTTGAAAAGAAATTTAGATTGAAAGACATTAAGAAACTTATTCAT
CGTTTAGATCCACAAATTCTAAGCATGAAAGATGAAATGTCAATTATGGATATTAATGAT
GAAAGAGCAAAAAAATTGGATGAAAAAATCAAAGAAAGAACTCAAGAACTGATTAATCCT
TACATTTCGGCTGCAGTTTTATTTGCTGACATTCATGACACATCAAGTCGACTTGTTGAA
AAAGGTTGCATTGGTGAAATTGTCCCATGGCGCACATCAAGACCTTGGTTCTATTGGCGA
CTTAATCGAATGCTTTTGACAAATTTCTTCATCAAGAAAATTTTAGAATGTGATCCAACA
TTGACACATTTGAAGGCTACATTAATGATTCGTCATTGGTTTATTGAAAACAAAGCTGGA
CAAAATCTTTATCAATGGGATGACAATCAACTTGTTGCAAATTGGCTTCAAGAGCAAAAA
GATCAAGAGAAAAATTCAACAATTTCGAAATATCTTGAAAAAATTCAAAAAGAAGCACTG
ACTCTTAAAATTCAATCATCATTTGAGCGAAGTCCGGATACAGTTCTTGATGCAGTTGTC
GGCTTATGCAGCAATATTCCAGCACAAAATCGTCGTGAAGTTATTCATCTTTTAACACAA
ATGGCTCTTGAAAAGTTTGAAGCAAAATTTGGTCATGAATAA
>g8007.t1 Gene=g8007 Length=2233
MTTKGKIDANLINDPLASKESSYPLTKNEKLRPRMSMSRHFLGKDIPRDFQMATTEEFVK
RFNGTFVIDKILVANNGYAAVKFIRSIRRWCKDTFKNEKAIKIIVLATPEDLAMNAEFIE
LADHCASISGGTENFSNIELILDAAKRAKANAVWPGWNAGEKNLKLAETLQKKDIAFLGP
SYQSLSLASDTINTFIIAQTIDIPTIQWNGSSLKLYSYSTGKKVKITDDLYDQAAITNID
QANQIAKNIGFPVVIKSAKGGEKSYRIIEHNSDFSAKFHQLLNEYQSPVIIMKHIPEARY
VEIPLIGDKEGNVISVFTRDCTIKRQNLNIIEEAPAIFTMPKYFDDMERAAIQIAKVLRF
EGVGSALFLYNPAESKFFFYDFSPYLQMEHACTEMLASMNLCACQVQVAMGISLNRIKDI
RMMLNESAWDNTPIDFEKTVKKQRSFGHVITARITADELIESFRPLKGGSIKELNFRSTR
DVWGYYHSNNYQHVSSTPYGHCFAWGDTRNEARQNLIMALKELSNINEIATCIEYLSTLL
DSSEFVHNAFYASYYDRIIAEKTKVTGKPETLMGVIAASIHIADRHINKLFSEYQAQLER
GQITCPDSLTNFCEVEMISDNLKYNVVAVKTGENLYTLIMNDCYKEVSIHRLPDGGVFMT
FDSTSHTTHLKEEFGRYYVTVGNKNCVFYKDFNPSILRSPSPGKLICWLVNDGDELVKDQ
PYAEIEVLKSILTLYCQENGIIRIIKNPGEYLERDTIIGHLELDYTTSIPEVEKYTGGWL
LGESYLKQEGHIRMLSKYKTILGNSLAGFCFPEPYNESYSRKAVKNFINHLKSPKLPLEE
LNEIMKKYSSRLPQTVEQRIRGLMKSYESNLDSIVANFPAGKIAFVIDDYASSIQKVRDR
DAFFITVQEILQLIQRYRSGIRNHMKNVVNMLLKQYYEVECHFQYAHYDKCVSQIRENYK
EDMQTVMNLIFSHSQVGKKNFLMMLLLDEALKDSEGLTDDVANTLNDLTTLTCEEHSRVA
LKARKFLITAHTPSYEIRRNQLESILLSAVDTRGSNGVNTESVQHLIESQTAIFDVLHEF
FFSPSITLCNIAMEIYIRRIRLPHELSSVQHCEHRLNHNRSFIPAVYYTFRLPKTHLETV
DKQKVIPLRIGCITAINGIEYFYELIDVILSYFESNIPMTSNEPIYIIYIAVKGLSDLPD
DQMSYLLQSLCLQQRDDLLTRKVRRITFLILKDKSFPKLFNYRARDNYEEDRITRSMEPA
GFYQLEINRLKLYEIQRLQTENCRMNLYLGTASVGEDRKLNDFRYFIRAIVRHSDLITNS
TSFESLLNEGERVLLEAIEELEIAMALPQAKKTDSNHIFMAFLPCVIMDPIVTQTEINKM
ISTYATRLWKLRVLQIEMKFILLTHKNEKKNYRLFVTSELGYFMDVSMYGEILDTRDNIL
KFKSINAELPGPFDNLPIATPYKTRDYIQRKRFLAQSKGTTYCYDFPDMFRQMSEKLWHE
FITARLNEQIHRPNQVLIECNELILIGEKLAEVKRPPGENEMSIVAWKLKLATPEFPDGR
ELILIANDLTASYGAISIHEALFFEKVSQLARLRKIPRILISASTGVRVGLDDELKSMFK
ISWRDRKDLDKGCKYIYLLSEDYSAISDQDILRTVLIEDEGESRYRITDVIGLKEGLGIE
NLHFASMIESETVQAYNEIVTISMVTSQTIGIGAQIVKHGKRVVQIEDSALVLANYTSLN
RNLGFEAYTSNQQIGGCEIMSKNGTTHKVEADDLDGIYTILHWLSYMSDKSGGNLPIVIP
SDQINRKIDFTPTKSLFDPRMMLSGRFWRDRWESGFFDRYSWSEIKQYYAPSAITGRARL
GGIPVGVIAAEMRTSEVKIPADPGQLNSQEKIVSQIGNYLYPDSAQKIAHAIKDFNREDL
PLIIFANWHGISSGQSSMMNGLLNYTTLIVEALREYKQPVFIYLPPHAEMRGGTWNLFSS
FINPHFIEMYADVETKAGVDNPESDVEKKFRLKDIKKLIHRLDPQILSMKDEMSIMDIND
ERAKKLDEKIKERTQELINPYISAAVLFADIHDTSSRLVEKGCIGEIVPWRTSRPWFYWR
LNRMLLTNFFIKKILECDPTLTHLKATLMIRHWFIENKAGQNLYQWDDNQLVANWLQEQK
DQEKNSTISKYLEKIQKEALTLKIQSSFERSPDTVLDAVVGLCSNIPAQNRREVIHLLTQ
MALEKFEAKFGHE
Transcript | Database | ID | Name | Start | End | E.value | |
---|---|---|---|---|---|---|---|
30 | g8007.t1 | CDD | cd06850 | biotinyl_domain | 697 | 758 | 0.0000001 |
22 | g8007.t1 | Gene3D | G3DSA:3.40.50.12210 | - | 32 | 190 | 0.0000000 |
20 | g8007.t1 | Gene3D | G3DSA:3.90.1770.10 | - | 192 | 234 | 0.0000000 |
19 | g8007.t1 | Gene3D | G3DSA:3.30.1490.20 | - | 235 | 294 | 0.0000000 |
17 | g8007.t1 | Gene3D | G3DSA:3.30.470.20 | - | 297 | 559 | 0.0000000 |
18 | g8007.t1 | Gene3D | G3DSA:2.40.50.100 | - | 693 | 763 | 0.0000000 |
23 | g8007.t1 | Gene3D | G3DSA:3.90.226.10 | - | 1461 | 1787 | 0.0000000 |
21 | g8007.t1 | Gene3D | G3DSA:2.40.460.10 | Biotin dependent carboxylase carboxyltransferase | 1610 | 1675 | 0.0000000 |
24 | g8007.t1 | Gene3D | G3DSA:3.90.226.10 | - | 1793 | 2195 | 0.0000000 |
6 | g8007.t1 | PANTHER | PTHR45728 | ACETYL-COA CARBOXYLASE, ISOFORM A | 26 | 1113 | 0.0000000 |
8 | g8007.t1 | PANTHER | PTHR45728:SF1 | ACETYL-COA CARBOXYLASE 2 | 26 | 1113 | 0.0000000 |
7 | g8007.t1 | PANTHER | PTHR45728 | ACETYL-COA CARBOXYLASE, ISOFORM A | 1172 | 2223 | 0.0000000 |
9 | g8007.t1 | PANTHER | PTHR45728:SF1 | ACETYL-COA CARBOXYLASE 2 | 1172 | 2223 | 0.0000000 |
5 | g8007.t1 | Pfam | PF00289 | Biotin carboxylase, N-terminal domain | 68 | 184 | 0.0000000 |
3 | g8007.t1 | Pfam | PF02786 | Carbamoyl-phosphate synthase L chain, ATP binding domain | 234 | 416 | 0.0000000 |
4 | g8007.t1 | Pfam | PF00364 | Biotin-requiring enzyme | 697 | 759 | 0.0000000 |
1 | g8007.t1 | Pfam | PF08326 | Acetyl-CoA carboxylase, central region | 762 | 1449 | 0.0000000 |
2 | g8007.t1 | Pfam | PF01039 | Carboxyl transferase domain | 1554 | 2105 | 0.0000000 |
26 | g8007.t1 | ProSiteProfiles | PS50979 | Biotin carboxylation domain profile. | 67 | 560 | 29.0030000 |
29 | g8007.t1 | ProSiteProfiles | PS50975 | ATP-grasp fold profile. | 214 | 410 | 21.0270000 |
27 | g8007.t1 | ProSiteProfiles | PS50968 | Biotinyl/lipoyl domain profile. | 688 | 762 | 18.0720000 |
28 | g8007.t1 | ProSiteProfiles | PS50980 | Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. | 1461 | 1799 | 29.8480000 |
25 | g8007.t1 | ProSiteProfiles | PS50989 | Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. | 1803 | 2116 | 31.5900000 |
16 | g8007.t1 | SMART | SM00878 | Biotin_carb_C_2 | 451 | 556 | 0.0001900 |
10 | g8007.t1 | SUPERFAMILY | SSF52440 | PreATP-grasp domain | 41 | 185 | 0.0000000 |
14 | g8007.t1 | SUPERFAMILY | SSF56059 | Glutathione synthetase ATP-binding domain-like | 195 | 424 | 0.0000000 |
11 | g8007.t1 | SUPERFAMILY | SSF51246 | Rudiment single hybrid motif | 447 | 557 | 0.0000000 |
15 | g8007.t1 | SUPERFAMILY | SSF51230 | Single hybrid motif | 690 | 763 | 0.0000000 |
13 | g8007.t1 | SUPERFAMILY | SSF52096 | ClpP/crotonase | 1461 | 1790 | 0.0000000 |
12 | g8007.t1 | SUPERFAMILY | SSF52096 | ClpP/crotonase | 1795 | 2177 | 0.0000000 |
IUPRED3 score over 0.5 is predictive of a disordered region.
GOID | TERM | ONTOLOGY |
---|---|---|
GO:0003989 | acetyl-CoA carboxylase activity | MF |
GO:0046872 | metal ion binding | MF |
GO:0005524 | ATP binding | MF |
GO:0006633 | fatty acid biosynthetic process | BP |
GO:0016874 | ligase activity | MF |
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
TPM values are indicated as average +/- STDEV.
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed