Gene loci information

Isoforms of this gene

  • There are 1 isoforms that are expressed from this gene.
  • The longest transcript is g9181.t1
  • List of isoforms

g9181.t1

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

Pathway

  • This gene belongs to the following 1 pathways
ko00460
ko00500
ko00999
ko01100
ko01110

This gene has too many mapped pathways (>3). Please look at the original KEGG entry above for pathway visualization.

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g9181.t1) is OG0000185. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 1 XP_012062485.1
Apis mellifera AMELL 1 GB54486-PA
Culicoides sonorensis CSONO 2 CSON012226-2, CSON012326-1
Polypedilum nubifer PNUBI 7 Pn.12666, Pn.00729, Pn.11943, Pn.11944, Pn.11105, Pn.12665, Pn.11945
Polypedilum vanderplanki PVAND 11 g1438.t1, g1442.t1, g9181.t1, g1436.t1, g7467.t1, g3676.t1, g1444.t1, g1443.t1, g1437.t1, g13263.t1, g1614.t1
Polypedilum pembai PPEMB 6 g6563.t1, g12230.t1, g10138.t1, g9649.t1, g6572.t1, g9648.t1
Belgica antarctica BANTA 6 IU25_05175-mRNA-1, IU25_01160-mRNA-1, IU25_12213-mRNA-1, IU25_05176-mRNA-1, IU25_08830-mRNA-1, IU25_02400-mRNA-1
Clunio marinus CMARI 7 CRL06339.1, CRK86862.1, CRL06340.1, CRL03447.1, CRK98477.1, CRK95548.1, CRK95547.1
Aedes aegypti lvpagwg AAEGYL 7 AAEL021375-PA, AAEL015020-PA, AAEL026915-PA, AAEL015573-PB, AAEL015051-PA, AAEL015022-PA, AAEL015021-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 8 EDS40247.1, EDS39831.1, EDS31871.1, EDS31869.1, EDS31870.1, EDS31872.1, EDS31873.1, EDS40246.1
Culex quinquefasciatus CQUIN 8 CPIJ008531-PA, CPIJ008532-PA, CPIJ014310-PA, CPIJ008528-PA, CPIJ014311-PA, CPIJ014063-PA, CPIJ008529-PA, CPIJ008530-PA
Anopheles atroparvus AATRO 6 AATE010933-PA, AATE010201-PA, AATE020429-PA, AATE005308-PA, AATE017726-PA, AATE005867-PA
Anopheles sinensis china ASINEC 4 ASIC002587-PA, ASIC002586-PA, ASIC002588-PA, ASIC006283-PA
Anopheles dirus ADIRU 2 ADIR007690-PA, ADIR011671-PA
Anopheles farauti AFARA 4 AFAF010568-PA, AFAF013907-PA, AFAF013664-PA, AFAF012895-PA
Anopheles epiroticus AEPIR 2 AEPI005723-PA, AEPI010131-PA
Anopheles christyi ACHRI 2 ACHR007910-PA, ACHR006458-PA
Anopheles merus AMERU 6 AMEM019254-PA, AMEM019250-PA, AMEM019253-PA, AMEM016320-PA, AMEM019252-PA, AMEM019251-PA
Anopheles melas AMELA 6 AMEC011586-PA, AMEC009509-PA, AMEC004375-PA, AMEC003043-PA, AMEC018913-PA, AMEC014420-PA
Anopheles arabiensis AARAB 5 AARA016515-PA, AARA016514-PA, AARA016517-PA, AARA016513-PA, AARA016516-PA
Anopheles coluzzii ACOLU 5 ACOM039764-PA, ACOM039760-PA, ACOM039759-PA, ACOM039758-PA, ACOM031129-PA
Anopheles coluzzii ngousso ACOLUN 6 ACON006424-PA, ACON006426-PA, ACON006425-PA, ACON006422-PA, ACON006423-PA, ACON000481-PA
Anopheles gambiae AGAMB 6 AGAP000481-PA, AGAP006425-PA, AGAP006426-PA, AGAP006424-PA, AGAP006423-PA, AGAP006422-PA
Anopheles quadriannulatus AQUAD 6 AQUA008028-PA, AQUA016589-PA, AQUA016587-PA, AQUA016585-PA, AQUA016586-PA, AQUA016588-PA
Anopheles minimus AMINI 6 AMIN015956-PA, AMIN005220-PA, AMIN015955-PA, AMIN015954-PA, AMIN015953-PA, AMIN015952-PA
Anopheles culicifacies ACULI 2 ACUA003678-PA, ACUA008364-PA
Anopheles funestus AFUNE 6 AFUN021776-PA, AFUN021775-PA, AFUN021778-PA, AFUN021876-PA, AFUN021779-PA, AFUN021777-PA
Anopheles stephensi indian ASTEPI 5 ASTEI11653-PA, ASTEI10270-PA, ASTEI04482-PA, ASTEI10268-PA, ASTEI10269-PA
Anopheles stephensi ASTEP 6 ASTE016136-PA, ASTE016135-PA, ASTE016132-PA, ASTE016134-PA, ASTE016133-PA, ASTE006138-PA
Anopheles albimanus AALBI 2 AALB005084-PA, AALB006765-PA
Anopheles darlingi ADARL 6 ADAC003506-PA, ADAC003513-PA, ADAC003511-PA, ADAC005792-PA, ADAC003514-PA, ADAC003512-PA
Drosophila willistoni DWILL 2 FBpp0378028, FBpp0245985
Drosophila pseudoobscura DPSEU 1 FBpp0286209
Drosophila persimilis DPERS 1 FBpp0177394
Drosophila ananassae DANAN 1 FBpp0127121
Drosophila melanogaster DMELA 1 FBpp0075080
Drosophila sechellia DSECH 1 FBpp0207132
Drosophila simulans DSIMU 1 FBpp0213062
Drosophila erecta DEREC 1 FBpp0132121
Drosophila yakuba DYAKU 1 FBpp0264882
Drosophila virilis DVIRI 1 FBpp0227614
Drosophila mojavensis DMOJA 1 FBpp0162584
Drosophila grimshawi DGRIM 1 FBpp0150127
Lucilia cuprina LCUPR 1 KNC21216
Musca domestica MDOME 2 MDOA001368-PA, MDOA014754-PA
Stomoxys calcitrans SCALC 2 SCAU009307-PB, SCAU014072-PA
Glossina brevipalpis GBREV 2 GBRI006483-PA, GBRI044593-PA
Glossina palpalis GPALP 2 GPPI047511-PA, GPPI014473-PA
Glossina austeni GAUST 2 GAUT032456-PA, GAUT010805-PA
Glossina pallidipes GPALL 1 GPAI018715-PA
Glossina morsitans GMORS 1 GMOY004598-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g9181.t1) is OG0000348. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN28925_c0_g1_i1.p1, TRINITY_DN78781_c0_g1_i1.p1, TRINITY_DN2797_c0_g1_i7.p1
Parochlus steinenii PSTEI PSG05887
Trissopelopia nemorum TNEMO TRINITY_DN3023_c1_g1_i5.p1, TRINITY_DN3023_c0_g1_i11.p1, TRINITY_DN24434_c0_g1_i1.p1, TRINITY_DN1303_c0_g1_i5.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN727_c0_g1_i5.p1, TRINITY_DN727_c1_g1_i1.p1, TRINITY_DN10854_c0_g1_i1.p1
Telmatogeton pecinata TPECI TRINITY_DN737_c0_g4_i6.p1, TRINITY_DN8845_c0_g1_i3.p1, TRINITY_DN1866_c0_g1_i8.p1, TRINITY_DN0_c5049_g2_i1.p1
Cricotopus draysoni CDRAY TRINITY_DN18040_c0_g1_i1.p1, TRINITY_DN53541_c0_g1_i1.p1, TRINITY_DN10154_c0_g1_i1.p1, TRINITY_DN13944_c0_g1_i1.p1, TRINITY_DN19179_c0_g1_i1.p1, TRINITY_DN8918_c0_g1_i1.p1, TRINITY_DN6193_c0_g1_i1.p1, TRINITY_DN10289_c0_g1_i1.p1, TRINITY_DN2092_c0_g1_i2.p1, TRINITY_DN30505_c0_g1_i1.p1
Clunio marinus CMARI CRK86862.1, CRL06340.1, CRL03447.1, CRK95548.1, CRK95547.1
Cardiocladius sp CARDI TRINITY_DN2465_c0_g1_i12.p1, TRINITY_DN9498_c0_g1_i2.p1, TRINITY_DN42825_c0_g1_i1.p1, TRINITY_DN2465_c0_g2_i1.p1
Belgica antarctica BANTA IU25_05175-mRNA-1, IU25_01160-mRNA-1, IU25_12213-mRNA-1, IU25_05176-mRNA-1, IU25_02400-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN50_c5_g1_i4.p1, TRINITY_DN23369_c0_g2_i3.p1, TRINITY_DN9663_c0_g1_i1.p1, TRINITY_DN9235_c0_g2_i1.p1, TRINITY_DN6799_c0_g1_i7.p1, TRINITY_DN35703_c0_g1_i1.p1, TRINITY_DN244497_c0_g1_i1.p1, TRINITY_DN9235_c0_g1_i6.p1
Chironomus riparius CRIPA g14344.t1, g11472.t1, g5235.t1, g5236.t1
Chironomus columbiensis CCOLU TRINITY_DN1571_c0_g1_i5.p1, TRINITY_DN70172_c0_g1_i1.p1, TRINITY_DN5270_c0_g1_i2.p1, TRINITY_DN4821_c0_g1_i17.p1, TRINITY_DN8988_c0_g1_i1.p1
Chironomus tentans CTENT g8842.t1, g11893.t1, g14580.t1, g6923.t1
Chironomus dilutus CDILU TRINITY_DN7739_c0_g1_i1.p1, TRINITY_DN49190_c0_g1_i1.p1, TRINITY_DN3143_c0_g1_i1.p1, TRINITY_DN4266_c0_g1_i5.p1
Polypedilum nubifer PNUBI Pn.12666, Pn.11943, Pn.11944, Pn.11105, Pn.12665, Pn.11945
Polypedilum vanderplanki PVAND g1438.t1, g1442.t1, g9181.t1, g1436.t1, g7467.t1, g3676.t1, g1444.t1, g1443.t1, g1437.t1, g1614.t1
Polypedilum pembai PPEMB g6563.t1, g12230.t1, g10138.t1, g9649.t1, g9648.t1
Culicoides sonorensis CSONO CSON012226-2
Aedes aegypti lvpagwg AAEGYL AAEL015051-PA
Anopheles gambiae AGAMB AGAP000481-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation