Gene loci information

Isoforms of this gene

  • There are 5 isoforms that are expressed from this gene.
  • The longest transcript is g194.t1
  • List of isoforms

g194.t1, g194.t2, g194.t3, g194.t4, g194.t5

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

Pathway

  • This gene belongs to the following 1 pathways
ko00510
ko00513
ko01100

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g194.t1) is OG0004520. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 1 XP_012056962.1
Apis mellifera AMELL 1 GB54328-PA
Culicoides sonorensis CSONO 1 CSON005258-1
Polypedilum nubifer PNUBI 1 Pn.13572
Polypedilum vanderplanki PVAND 1 g194.t1
Polypedilum pembai PPEMB 1 g8380.t1
Belgica antarctica BANTA 1 IU25_07734-mRNA-1
Clunio marinus CMARI 1 CRK87969.1
Aedes aegypti lvpagwg AAEGYL 1 AAEL000559-PB
Culex quinquefasciatus quinquefasciatus CQUINQ 1 EDS45158.1
Culex quinquefasciatus CQUIN 1 CPIJ017415-PA
Anopheles atroparvus AATRO 1 AATE007064-PA
Anopheles sinensis china ASINEC 2 ASIC007889-PA, ASIC022139-PA
Anopheles dirus ADIRU 1 ADIR002146-PA
Anopheles farauti AFARA 1 AFAF001392-PA
Anopheles epiroticus AEPIR 1 AEPI001162-PA
Anopheles christyi ACHRI 0 none
Anopheles merus AMERU 1 AMEM001772-PA
Anopheles melas AMELA 1 AMEC004783-PA
Anopheles arabiensis AARAB 1 AARA006237-PA
Anopheles coluzzii ACOLU 1 ACOM037992-PA
Anopheles coluzzii ngousso ACOLUN 1 ACON011324-PA
Anopheles gambiae AGAMB 1 AGAP011324-PA
Anopheles quadriannulatus AQUAD 1 AQUA002245-PA
Anopheles minimus AMINI 1 AMIN009163-PA
Anopheles culicifacies ACULI 1 ACUA009437-PA
Anopheles funestus AFUNE 1 AFUN007121-PA
Anopheles stephensi indian ASTEPI 1 ASTEI04231-PA
Anopheles stephensi ASTEP 1 ASTE011250-PA
Anopheles albimanus AALBI 1 AALB007385-PA
Anopheles darlingi ADARL 1 ADAC001411-PA
Drosophila willistoni DWILL 1 FBpp0249441
Drosophila pseudoobscura DPSEU 1 FBpp0286567
Drosophila persimilis DPERS 1 FBpp0178255
Drosophila ananassae DANAN 1 FBpp0351165
Drosophila melanogaster DMELA 1 FBpp0078076
Drosophila sechellia DSECH 1 FBpp0203867
Drosophila simulans DSIMU 1 FBpp0213381
Drosophila erecta DEREC 1 FBpp0134755
Drosophila yakuba DYAKU 2 FBpp0359154, FBpp0356706
Drosophila virilis DVIRI 1 FBpp0228154
Drosophila mojavensis DMOJA 1 FBpp0386898
Drosophila grimshawi DGRIM 1 FBpp0404605
Lucilia cuprina LCUPR 1 KNC27988
Musca domestica MDOME 1 MDOA011164-PA
Stomoxys calcitrans SCALC 1 SCAU005336-PA
Glossina brevipalpis GBREV 1 GBRI031437-PA
Glossina palpalis GPALP 1 GPPI005649-PA
Glossina austeni GAUST 1 GAUT024036-PA
Glossina pallidipes GPALL 1 GPAI013385-PA
Glossina morsitans GMORS 1 GMOY004399-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g194.t1) is OG0008391. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN4246_c0_g1_i29.p1
Parochlus steinenii PSTEI PSG03112
Trissopelopia nemorum TNEMO TRINITY_DN3391_c0_g1_i1.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN1928_c0_g1_i2.p1
Telmatogeton pecinata TPECI TRINITY_DN12423_c0_g1_i1.p1
Cricotopus draysoni CDRAY TRINITY_DN6395_c0_g1_i1.p1
Clunio marinus CMARI CRK87969.1
Cardiocladius sp CARDI TRINITY_DN7465_c0_g1_i4.p1
Belgica antarctica BANTA IU25_07734-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN4453_c0_g2_i1.p1, TRINITY_DN4453_c0_g1_i9.p1
Chironomus riparius CRIPA g17013.t1
Chironomus columbiensis CCOLU TRINITY_DN2023_c0_g1_i5.p1
Chironomus tentans CTENT g6055.t1
Chironomus dilutus CDILU none
Polypedilum nubifer PNUBI Pn.13572
Polypedilum vanderplanki PVAND g194.t1
Polypedilum pembai PPEMB g8380.t1
Culicoides sonorensis CSONO CSON005258-1
Aedes aegypti lvpagwg AAEGYL AAEL000559-PB
Anopheles gambiae AGAMB AGAP011324-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation